RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 MTFR1Q15390 333 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 LRRC8DQ7L1W4 858 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 FAM131BQ86XD5 332 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 CREG2Q8IUH2 290 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 FOXRED2Q8IWF2 684 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 SPAG16Q8N0X2 631 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 CNTD1Q8N815 330 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 SLC17A8Q8NDX2 589 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 OR4C6Q8NH72 309 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 NCOA7Q8NI08 942 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 RFFLQ8WZ73 363 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 C1orf50Q9BV19 199 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 RACGAP1Q9H0H5 632 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 LEF1Q9UJU2 399 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 PCDHB12Q9Y5F1 795 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 ADGRA2Q96PE1 1338 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 SHANK2Q9UPX8 1470 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 PLD2O14939 933 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 TRIM13O60858 407 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 NOL4O94818 638 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 ANPEPP15144 967 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 CHMLP26374 656 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 CALML3P27482 149 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 GPC1P35052 558 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 MAGEA6P43360 314 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 CCR9P51686 369 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 SLC7A2P52569 658 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 ERVK-21P61565 698 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 KCNJ2P63252 427 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 PRKCQQ04759 706 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 SGCGQ13326 291 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 PKN2Q16513 984 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 BEND3Q5T5X7 828 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 ADGRF1Q5T601 910 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 OR2L5Q8NG80 312 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 SLC20A1Q8WUM9 679 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 SLC22A4Q9H015 551 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 BIN3Q9NQY0 253 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 TAS2R1Q9NYW7 299 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 PNMA8BQ9ULN7 279 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 DTNAQ9Y4J8 743 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 EIF2AK4Q9P2K8 1649 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 M0R3G1 203 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 MGRN1O60291 552 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 BMP1P13497 986 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 YWHABP31946 246 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 ARSEP51690 589 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 UBE3CQ15386 1083 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 TMEM95Q3KNT9 176 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 UBXN11Q5T124 520 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 STRA8Q7Z7C7 330 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 NUDT13Q86X67 352 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 MCEMP1Q8IX19 187 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 STX19Q8N4C7 294 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 NOA1Q8NC60 698 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 ZMYND12Q9H0C1 365 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 FAM153AQ9UHL3 310 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 MTO1Q9Y2Z2 717 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 ST14Q9Y5Y6 855 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 UNC13BO14795 1591 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 INO80Q9ULG1 1556 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 A0A1W2PPL8 197 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 BTBD17A6NE02 478 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 AIM2O14862 343 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 CYP2A6P11509 494 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 NFKB1P19838 968 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 POU1F1P28069 291 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ALG11Q2TAA5 492 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 VWA5B1Q5TIE3 1220 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 TAF8Q7Z7C8 310 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 SETD6Q8TBK2 473 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 POC1BQ8TC44 478 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 FIG4Q92562 907 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 MUL1Q969V5 352 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 TRNT1Q96Q11 434 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 ASPSCR1Q9BZE9 553 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 EHD4Q9H223 541 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 SMYD2Q9NRG4 433 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 TMLHEQ9NVH6 421 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 RIC8BQ9NVN3 520 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 TLR7Q9NYK1 1049 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 SMG5Q9UPR3 1016 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 AKT3Q9Y243 479 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 UTP11Q9Y3A2 253 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 GNA14O95837 355 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 BCL10O95999 233 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 LCKP06239 509 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 S100A2P29034 98 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 RPL5P46777 297 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 POU4F2Q12837 409 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 PAN3Q58A45 887 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 LDLRAP1Q5SW96 308 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 IQSEC1Q6DN90 963 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 CYP20A1Q6UW02 462 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 SPATC1Q76KD6 591 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 SLC13A5Q86YT5 568 aaPredicted RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 FAM109AQ8N4B1 249 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 SNX19Q92543 992 aa6.37□□□□□ -1.39
CLCN3-204ENST00000504131 DDX17Q92841 729 aaKnown RBP6.37□□□□□ -1.39
CLCN3-204ENST00000504131 AIDAQ96BJ3 306 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms