RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 CRACR2AQ9BSW2 395 aa18■□□□□ 0.47
HDAC11-220ENST00000498532 TMEM121BQ9BXQ6 578 aaPredicted RBP18■□□□□ 0.47
HDAC11-220ENST00000498532 GAREM1Q9H706 876 aa18■□□□□ 0.47
HDAC11-220ENST00000498532 POPDC2Q9HBU9 364 aa18■□□□□ 0.47
HDAC11-220ENST00000498532 ACP6Q9NPH0 428 aa18■□□□□ 0.47
HDAC11-220ENST00000498532 TJP2Q9UDY2 1190 aa18■□□□□ 0.47
HDAC11-220ENST00000498532 CYTH4Q9UIA0 394 aa18■□□□□ 0.47
HDAC11-220ENST00000498532 LUC7L3O95232 432 aaKnown RBP17.99■□□□□ 0.47
HDAC11-220ENST00000498532 USP8P40818 1118 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 MATKP42679 507 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 YWHAZP63104 245 aaKnown RBP17.99■□□□□ 0.47
HDAC11-220ENST00000498532 TRIP6Q15654 476 aaKnown RBP17.99■□□□□ 0.47
HDAC11-220ENST00000498532 DCAF6Q58WW2 860 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 GJB7Q6PEY0 223 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 TMEM110Q86TL2 294 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 CHSY1Q86X52 802 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 C1orf216Q8TAB5 229 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 MED15Q96RN5 788 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 RSPH9Q9H1X1 276 aaPredicted RBP17.99■□□□□ 0.47
HDAC11-220ENST00000498532 MTG2Q9H4K7 406 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 THAP9Q9H5L6 903 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 KIAA1468Q9P260 1216 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 APEX2Q9UBZ4 518 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 KLK13Q9UKR3 277 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 ZMIZ1Q9ULJ6 1067 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 CEP83Q9Y592 693 aa17.99■□□□□ 0.47
HDAC11-220ENST00000498532 RNASEH1O60930 286 aaKnown RBP17.98■□□□□ 0.47
HDAC11-220ENST00000498532 MOCS3O95396 460 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 TRUB2O95900 331 aaKnown RBP17.98■□□□□ 0.47
HDAC11-220ENST00000498532 CAMK4Q16566 473 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 ARHGAP44Q17R89 818 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 HLA-BQ31612 363 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 HNRNPA1L2Q32P51 320 aaKnown RBP17.98■□□□□ 0.47
HDAC11-220ENST00000498532 ZC3H12AQ5D1E8 599 aaKnown RBP17.98■□□□□ 0.47
HDAC11-220ENST00000498532 FSCBQ5H9T9 825 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 PITRM1Q5JRX3 1037 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 RAP1GAP2Q684P5 730 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 GBP6Q6ZN66 633 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 MMS22LQ6ZRQ5 1243 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 LGI2Q8N0V4 545 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 KDF1Q8NAX2 398 aaPredicted RBP17.98■□□□□ 0.47
HDAC11-220ENST00000498532 MYO19Q96H55 970 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 BTN2A3PQ96KV6 586 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 FAM204AQ9H8W3 233 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 IL21RQ9HBE5 538 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 SGK2Q9HBY8 427 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 XPO7Q9UIA9 1087 aaKnown RBP17.98■□□□□ 0.47
HDAC11-220ENST00000498532 INTS6Q9UL03 887 aaKnown RBP17.98■□□□□ 0.47
HDAC11-220ENST00000498532 SCML1Q9UN30 329 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 NCKAP1Q9Y2A7 1128 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 FNDC3AQ9Y2H6 1198 aaKnown RBP17.98■□□□□ 0.47
HDAC11-220ENST00000498532 MSRB2Q9Y3D2 182 aa17.98■□□□□ 0.47
HDAC11-220ENST00000498532 NYNRINQ9P2P1 1898 aaKnown RBP17.97■□□□□ 0.47
HDAC11-220ENST00000498532 A0A1B0GVT2 93 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 SIN3BO75182 1162 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 FSBPO95073 299 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 IGLV3-25P01717 112 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 ZNF883P0CG24 379 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 SLC9A1P19634 815 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 TACR2P21452 398 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 CSNK1EP49674 416 aaKnown RBP17.97■□□□□ 0.47
HDAC11-220ENST00000498532 UBE2HP62256 183 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 BNC1Q01954 994 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 TEAD4Q15561 434 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 RNF219Q5W0B1 726 aaPredicted RBP17.97■□□□□ 0.47
HDAC11-220ENST00000498532 DHX40Q8IX18 779 aaKnown RBP17.97■□□□□ 0.47
HDAC11-220ENST00000498532 CHCHD4Q8N4Q1 142 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 KDM1BQ8NB78 822 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 GANCQ8TET4 914 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 SETD7Q8WTS6 366 aaKnown RBP17.97■□□□□ 0.47
HDAC11-220ENST00000498532 ZCCHC14Q8WYQ9 949 aaKnown RBP17.97■□□□□ 0.47
HDAC11-220ENST00000498532 BIRC7Q96CA5 298 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 MRGPRX3Q96LB0 322 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 PABPC3Q9H361 631 aaKnown RBP17.97■□□□□ 0.47
HDAC11-220ENST00000498532 TM7SF3Q9NS93 570 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 KIAA1522Q9P206 1035 aaPredicted RBP17.97■□□□□ 0.47
HDAC11-220ENST00000498532 PCOLCE2Q9UKZ9 415 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 SLCO1B1Q9Y6L6 691 aa17.97■□□□□ 0.47
HDAC11-220ENST00000498532 FAM208BQ5VWN6 2430 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 BECN2A8MW95 431 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 F5H5T6 163 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 SRPRAP08240 638 aaKnown RBP17.96■□□□□ 0.47
HDAC11-220ENST00000498532 FTH1P19P0C7X4 201 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 CTSOP43234 321 aaPredicted RBP17.96■□□□□ 0.47
HDAC11-220ENST00000498532 GRIA4P48058 902 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 APBA1Q02410 837 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 SFSWAPQ12872 951 aaKnown RBP17.96■□□□□ 0.47
HDAC11-220ENST00000498532 ARID5BQ14865 1188 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 TAF5Q15542 800 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 EXOC3L4Q17RC7 722 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 USP30Q70CQ3 517 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 RAB44Q7Z6P3 723 aaPredicted RBP17.96■□□□□ 0.47
HDAC11-220ENST00000498532 PASD1Q8IV76 773 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 ATP6V0D2Q8N8Y2 350 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 SHC3Q92529 594 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 NOX5Q96PH1 765 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 TM9SF3Q9HD45 589 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 OSGEPQ9NPF4 335 aa17.96■□□□□ 0.47
HDAC11-220ENST00000498532 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.96■□□□□ 0.47
HDAC11-220ENST00000498532 FBXL12Q9NXK8 326 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms