RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 IRX2Q9BZI1 471 aaPredicted RBP20.7■□□□□ 0.9
CTSD-206ENST00000497544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.7■□□□□ 0.9
CTSD-206ENST00000497544 KIF26AQ9ULI4 1882 aaPredicted RBP20.69■□□□□ 0.9
CTSD-206ENST00000497544 TYW5A2RUC4 315 aaKnown RBP20.69■□□□□ 0.9
CTSD-206ENST00000497544 I6L893 689 aaPredicted RBP20.69■□□□□ 0.9
CTSD-206ENST00000497544 ARNTLO00327 626 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 COMTP21964 271 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 SCAPQ12770 1279 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 AUHQ13825 339 aaKnown RBP20.69■□□□□ 0.9
CTSD-206ENST00000497544 ZFYVE27Q5T4F4 411 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 C11orf63Q6NUN7 778 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 CPNE8Q86YQ8 564 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 PSTKQ8IV42 348 aaKnown RBP20.69■□□□□ 0.9
CTSD-206ENST00000497544 SYCE1Q8N0S2 351 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 TRIM44Q96DX7 344 aaPredicted RBP20.69■□□□□ 0.9
CTSD-206ENST00000497544 PEBP4Q96S96 227 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 PRMT1Q99873 361 aaKnown RBP20.69■□□□□ 0.9
CTSD-206ENST00000497544 SNRNP25Q9BV90 132 aaKnown RBP20.69■□□□□ 0.9
CTSD-206ENST00000497544 BBS2Q9BXC9 721 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 DHX35Q9H5Z1 703 aaKnown RBP20.69■□□□□ 0.9
CTSD-206ENST00000497544 TRMT1Q9NXH9 659 aaKnown RBP20.69■□□□□ 0.9
CTSD-206ENST00000497544 OR12D3Q9UGF7 316 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 HYOU1Q9Y4L1 999 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 SNX10Q9Y5X0 201 aa20.69■□□□□ 0.9
CTSD-206ENST00000497544 SRGAP2O75044 1071 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 CYP17A1P05093 508 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 KRT7P08729 469 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 ADH5P11766 374 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 TNNT1P13805 278 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 TCF4P15884 667 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 IL1R2P27930 398 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 GJC1P36383 396 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 GGCXP38435 758 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 AMPD2Q01433 879 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 RABGAP1LQ5R372 815 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 BHMTQ93088 406 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 RPRD1AQ96P16 312 aaPredicted RBP20.68■□□□□ 0.9
CTSD-206ENST00000497544 GPATCH2LQ9NWQ4 482 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 VANGL2Q9ULK5 521 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 PYCARDQ9ULZ3 195 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 AP4E1Q9UPM8 1137 aa20.68■□□□□ 0.9
CTSD-206ENST00000497544 TICRRQ7Z2Z1 1910 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 OTOL1A6NHN0 477 aaPredicted RBP20.67■□□□□ 0.9
CTSD-206ENST00000497544 NEDD8-MDP1E9PL57 170 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 TBL1XO60907 577 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 PALMO75781 387 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 RARAP10276 462 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 HOXB3P14651 431 aaPredicted RBP20.67■□□□□ 0.9
CTSD-206ENST00000497544 L1CAMP32004 1257 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 TAS2R40P59535 323 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 SLC25A11Q02978 314 aaKnown RBP20.67■□□□□ 0.9
CTSD-206ENST00000497544 SMTNL2Q2TAL5 461 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 SLC44A4Q53GD3 710 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 KCNT1Q5JUK3 1230 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 FBXL22Q6P050 247 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 C14orf80Q86SX3 495 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 HJURPQ8NCD3 748 aaPredicted RBP20.67■□□□□ 0.9
CTSD-206ENST00000497544 TEKT4Q8WW24 435 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 HSPH1Q92598 858 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 MAGEB5Q9BZ81 275 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 GOLPH3Q9H4A6 298 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 C8orf33Q9H7E9 229 aaPredicted RBP20.67■□□□□ 0.9
CTSD-206ENST00000497544 PLK2Q9NYY3 685 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 STIM2Q9P246 746 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 FBXL21Q9UKT6 434 aa20.67■□□□□ 0.9
CTSD-206ENST00000497544 FASNP49327 2511 aaKnown RBP20.66■□□□□ 0.9
CTSD-206ENST00000497544 GRID2IPA4D2P6 1211 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 E9PAM4 449 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 GFRA2O00451 464 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 HOXC11O43248 304 aaPredicted RBP20.66■□□□□ 0.9
CTSD-206ENST00000497544 CREB3O43889 395 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 TYRP14679 529 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 RPS24P62847 133 aaKnown RBP20.66■□□□□ 0.9
CTSD-206ENST00000497544 MPP7Q5T2T1 576 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 CYP4V2Q6ZWL3 525 aaPredicted RBP20.66■□□□□ 0.9
CTSD-206ENST00000497544 CCDC117Q8IWD4 279 aaPredicted RBP20.66■□□□□ 0.9
CTSD-206ENST00000497544 REXO1L1PQ8IX06 675 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 RHOT1Q8IXI2 618 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 CFAP52Q8N1V2 620 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 PYROXD2Q8N2H3 581 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 XPO6Q96QU8 1125 aaKnown RBP20.66■□□□□ 0.9
CTSD-206ENST00000497544 EPAS1Q99814 870 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 HEBP1Q9NRV9 189 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 MARK1Q9P0L2 795 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 WNT16Q9UBV4 365 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 AMFRQ9UKV5 643 aa20.66■□□□□ 0.9
CTSD-206ENST00000497544 GLULP15104 373 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 GJA4P35212 333 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 NRG1Q02297 640 aaPredicted RBP20.65■□□□□ 0.9
CTSD-206ENST00000497544 CA9Q16790 459 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 ATP13A4Q4VNC1 1196 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 ODF2Q5BJF6 829 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 LRRC38Q5VT99 294 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 TTC39BQ5VTQ0 682 aaPredicted RBP20.65■□□□□ 0.9
CTSD-206ENST00000497544 FYB2Q5VWT5 728 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 TXNRD3NBQ6F5E7 133 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 PEX26Q7Z412 305 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 NAT16Q8N8M0 369 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 IGSF8Q969P0 613 aa20.65■□□□□ 0.9
CTSD-206ENST00000497544 MYEOVQ96EZ4 313 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms