RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 MS4A13Q5J8X5 152 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 HP1BP3Q5SSJ5 553 aaPredicted RBP16.84■□□□□ 0.29
HLA-A-208ENST00000496081 ARHGEF18Q6ZSZ5 1173 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 HERC6Q8IVU3 1022 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 TCEAL8Q8IYN2 117 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 ZBED8Q8IZ13 594 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 ZNF683Q8IZ20 524 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 ATP6V0D2Q8N8Y2 350 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 HDAC11Q96DB2 347 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 BTN2A3PQ96KV6 586 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 FERMT1Q9BQL6 677 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 TMEM109Q9BVC6 243 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 BRD8Q9H0E9 1235 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 CENPHQ9H3R5 247 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 CATSPERBQ9H7T0 1116 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 E7ESA3 106 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 PRRG1O14668 218 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 BANF1O75531 89 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 HMBSP08397 361 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 MX2P20592 715 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 ELF1P32519 619 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 GARSP41250 739 aaKnown RBP16.84■□□□□ 0.29
HLA-A-208ENST00000496081 RING1Q06587 406 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 TWF1Q12792 350 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 CCDC13Q8IYE1 715 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 SH2D3CQ8N5H7 860 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 SP7Q8TDD2 431 aaPredicted RBP16.84■□□□□ 0.29
HLA-A-208ENST00000496081 HERVK_113Q902F9 699 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 TRMT2BQ96GJ1 504 aaKnown RBP16.84■□□□□ 0.29
HLA-A-208ENST00000496081 CELF6Q96J87 481 aaKnown RBP16.84■□□□□ 0.29
HLA-A-208ENST00000496081 CDK5RAP1Q96SZ6 601 aaKnown RBP16.84■□□□□ 0.29
HLA-A-208ENST00000496081 RAD9AQ99638 391 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 CEP41Q9BYV8 373 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 SEPT10Q9P0V9 454 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 SLC12A6Q9UHW9 1150 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 SLC4A7Q9Y6M7 1214 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 PLXNA4Q9HCM2 1894 aa16.84■□□□□ 0.29
HLA-A-208ENST00000496081 HMGB1P1B2RPK0 211 aaPredicted RBP16.83■□□□□ 0.28
HLA-A-208ENST00000496081 KCNK1O00180 336 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 EIF3HO15372 352 aaKnown RBP eCLIP16.83■□□□□ 0.28
HLA-A-208ENST00000496081 OPHN1O60890 802 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 STK10O94804 968 aaKnown RBP16.83■□□□□ 0.28
HLA-A-208ENST00000496081 APRTP07741 180 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 CNPP09543 421 aaKnown RBP16.83■□□□□ 0.28
HLA-A-208ENST00000496081 ATP5C1P36542 298 aaKnown RBP16.83■□□□□ 0.28
HLA-A-208ENST00000496081 CREMQ03060 361 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 ARHGAP12Q8IWW6 846 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 PDIK1LQ8N165 341 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 ZNF567Q8N184 647 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 DEPDC1BQ8WUY9 529 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 MPP6Q9NZW5 540 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 ADAM21Q9UKJ8 722 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 VANGL2Q9ULK5 521 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 MAFFQ9ULX9 164 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 INSL5Q9Y5Q6 135 aa16.83■□□□□ 0.28
HLA-A-208ENST00000496081 MYO18AQ92614 2054 aaKnown RBP16.83■□□□□ 0.28
HLA-A-208ENST00000496081 LCHNA4D1U4 455 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 ZNF189O75820 626 aaPredicted RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 SPATA31D3P0C874 917 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 CA8P35219 290 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 KPNA1P52294 538 aaPredicted RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 PLD1Q13393 1074 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 MTM1Q13496 603 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 SEMA5AQ13591 1074 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 AUHQ13825 339 aaKnown RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 VEPH1Q14D04 833 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 TAF12Q16514 161 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 AGBL2Q5U5Z8 902 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 SPATA31D4Q6ZUB0 917 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 DNAJB7Q7Z6W7 309 aaPredicted RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 TADA2BQ86TJ2 420 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 ANKMY2Q8IV38 441 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 PHOSPHO2Q8TCD6 241 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 EPS8L3Q8TE67 593 aaKnown RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 EXOC4Q96A65 974 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 PKNOX2Q96KN3 472 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 TTC25Q96NG3 672 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 WDR83Q9BRX9 315 aaKnown RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 NDFIP2Q9NV92 336 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 TRPM5Q9NZQ8 1165 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 DNMT3LQ9UJW3 386 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 SSX2IPQ9Y2D8 614 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 HBS1LQ9Y450 684 aaKnown RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 LAMA2P24043 3122 aaKnown RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 TLDC2A0PJX2 215 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 WASH4PA8MWX3 477 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 TLL1O43897 1013 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 ABHD2P08910 425 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 ATP2A2P16615 1042 aaKnown RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 PTPN3P26045 913 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 FDFT1P37268 417 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 CBLBQ13191 982 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 BBS9Q3SYG4 887 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 HECTD3Q5T447 861 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 KLHDC10Q6PID8 442 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 PPP1R21Q6ZMI0 780 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 LZTR1Q8N653 840 aa16.82■□□□□ 0.28
HLA-A-208ENST00000496081 RTL3Q8N8U3 475 aaKnown RBP16.82■□□□□ 0.28
HLA-A-208ENST00000496081 FAM76AQ8TAV0 307 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms