RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 MTSS1O43312 755 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 ACSL4O60488 711 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 MAP3K6O95382 1288 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 ZSCAN5DPP0CG00 497 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 RHOQP17081 205 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 PBX2P40425 430 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 ITGA8P53708 1063 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 CASP8Q14790 479 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 PRKD1Q15139 912 aaPredicted RBP25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 MREGQ8N565 214 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 RTL3Q8N8U3 475 aaKnown RBP25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 SLC22A17Q8WUG5 538 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 HTR3CQ8WXA8 447 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 KLF16Q9BXK1 252 aaPredicted RBP25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 LRRC3Q9BY71 257 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 C10orf88Q9H8K7 445 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 VANGL2Q9ULK5 521 aa25.1■■□□□ 1.61
PPP1R3F-205ENST00000495799 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 IGLV3-10A0A075B6K4 115 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 F5H5T6 163 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 LATS1O95835 1130 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 OLFM2O95897 454 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 POU2F2P09086 479 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 ETS1P14921 441 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 PTPN2P17706 415 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 RPL22P35268 128 aaKnown RBP25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 ZNF33AQ06730 810 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 GALNT2Q10471 571 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 MORF4L2Q15014 288 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 RAP1GAP2Q684P5 730 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 GLIS1Q8NBF1 620 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 CCNYQ8ND76 341 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 HDAC11Q96DB2 347 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 CORO1BQ9BR76 489 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 FUT8Q9BYC5 575 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 VIPAS39Q9H9C1 493 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 ZDHHC7Q9NXF8 308 aa25.09■■□□□ 1.61
PPP1R3F-205ENST00000495799 FAM153BP0C7A2 387 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 TACR2P21452 398 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 DDX6P26196 483 aaKnown RBP eCLIP25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 KCNQ1P51787 676 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 AP1B1Q10567 949 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 KCTD19Q17RG1 926 aaPredicted RBP25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 FAM153CQ494X1 144 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 C14orf80Q86SX3 495 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 ZNF683Q8IZ20 524 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 HS6ST3Q8IZP7 471 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 PRMT1Q99873 361 aaKnown RBP25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 RNF38Q9H0F5 515 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 ATXN3LQ9H3M9 355 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 PRDM12Q9H4Q4 367 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 SLC28A3Q9HAS3 691 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 FAM153AQ9UHL3 310 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 DENND4CQ5VZ89 1909 aa25.08■■□□□ 1.61
PPP1R3F-205ENST00000495799 C5orf60A6NFR6 353 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 SPDYE4A6NLX3 237 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 GCATO75600 419 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 STC2O76061 302 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 MYL4P12829 197 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 HDCP19113 662 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 CORO1AP31146 461 aaKnown RBP25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 EPHA5P54756 1037 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 PPIDQ08752 370 aaKnown RBP25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 SLMAPQ14BN4 828 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 HIBCHQ6NVY1 386 aaPredicted RBP25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 PRUNE1Q86TP1 453 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 HOOK3Q86VS8 718 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 LRRC49Q8IUZ0 686 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 TNS4Q8IZW8 715 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 NPWQ8N729 165 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 RPRD1AQ96P16 312 aaPredicted RBP25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 TMEM248Q9NWD8 314 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 SHOC2Q9UQ13 582 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 TRAV19A0A0A6YYK7 116 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 DRGXA6NNA5 263 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 EPCAMP16422 314 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 HSPA9P38646 679 aaKnown RBP25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 GARSP41250 739 aaKnown RBP25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 ARHGAP15Q53QZ3 475 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 SPDYCQ5MJ68 293 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 FBXL22Q6P050 247 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 RHBDF2Q6PJF5 856 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 GAREM2Q75VX8 874 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 PPIL6Q8IXY8 311 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 GDAP1L1Q96MZ0 367 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 LGMNQ99538 433 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 KLC2Q9H0B6 622 aa25.07■■□□□ 1.6
PPP1R3F-205ENST00000495799 SOBPA7XYQ1 873 aa25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 MAP2K7O14733 419 aa25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 BMP8BP34820 402 aa25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 NDST2P52849 883 aa25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 CYP4F8P98187 520 aa25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 RABGAP1LQ5R372 815 aa25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 TXNDC8Q6A555 127 aa25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 B4GALNT4Q76KP1 1039 aa25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 NLRP14Q86W24 1093 aa25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 ARL14EPQ8N8R7 260 aaPredicted RBP25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 ARNTL2Q8WYA1 636 aa25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 LSM7Q9UK45 103 aaKnown RBP25.06■■□□□ 1.6
PPP1R3F-205ENST00000495799 OPHN1O60890 802 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms