RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ITGB3BPQ13352 177 aaPredicted RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 KCNC3Q14003 757 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 ZNF267Q14586 743 aaPredicted RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 RABEP1Q15276 862 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 NRN1LQ496H8 165 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 ATXN7L2Q5T6C5 722 aaPredicted RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 ZNF529Q6P280 563 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 SYCE2Q6PIF2 218 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 TMEM184AQ6ZMB5 413 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 SLC24A5Q71RS6 500 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 GPRIN1Q7Z2K8 1008 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 KIAA0319LQ8IZA0 1049 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 OR10H5Q8NGA6 315 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 CASKIN2Q8WXE0 1202 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 TNPO1Q92973 898 aaKnown RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 PGBD1Q96JS3 809 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 CDCA3Q99618 268 aaPredicted RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 PRRX2Q99811 253 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 ADAM2Q99965 735 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 VRK1Q99986 396 aaPredicted RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 APOL5Q9BWW9 433 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 CWH43Q9H720 699 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 METTL14Q9HCE5 456 aaKnown RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 AGO4Q9HCK5 861 aaKnown RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 RGS18Q9NS28 235 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 SLC23A1Q9UHI7 598 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 PNMA8BQ9ULN7 279 aaPredicted RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 ST3GAL5Q9UNP4 418 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 TSC22D4Q9Y3Q8 395 aa7.15□□□□□ -1.26
VIM-207ENST00000495528 CFAP20Q9Y6A4 193 aaKnown RBP7.15□□□□□ -1.26
VIM-207ENST00000495528 WDFY4Q6ZS81 3184 aa7.15□□□□□ -1.27
VIM-207ENST00000495528 C5orf42Q9H799 3197 aa7.15□□□□□ -1.27
VIM-207ENST00000495528 ATG2AQ2TAZ0 1938 aa7.15□□□□□ -1.27
VIM-207ENST00000495528 TCRBV7S2A1N4TA0A589 114 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 DENND3A2RUS2 1198 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 GOLGA6L6A8MZA4 724 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 NCANO14594 1321 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 KIAA0391O15091 583 aaKnown RBP7.14□□□□□ -1.27
VIM-207ENST00000495528 HBP1O60381 514 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 OFD1O75665 1012 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 NFASCO94856 1347 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 CCNE2O96020 404 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 PDGFBP01127 241 aaPredicted RBP7.14□□□□□ -1.27
VIM-207ENST00000495528 CALM1P0DP23 149 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 CALM2P0DP24 149 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 CALM3P0DP25 149 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 SP100P23497 879 aaPredicted RBP7.14□□□□□ -1.27
VIM-207ENST00000495528 AKAP5P24588 427 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 TECP42680 631 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 FAM189BP81408 668 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 CREMQ03060 361 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 KHDC1Q4VXA5 237 aaKnown RBP7.14□□□□□ -1.27
VIM-207ENST00000495528 CEP55Q53EZ4 464 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 PLPP4Q5VZY2 271 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 ANKRD54Q6NXT1 300 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 LRRC55Q6ZSA7 311 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 TMTC3Q6ZXV5 915 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 HEATR3Q7Z4Q2 680 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 TTC7BQ86TV6 843 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 C1orf210Q8IVY1 113 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 THNSL1Q8IYQ7 743 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 TMTC2Q8N394 836 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 FANCBQ8NB91 859 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 COLGALT1Q8NBJ5 622 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 ZFP28Q8NHY6 868 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 IFI44Q8TCB0 444 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 KAT6AQ92794 2004 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 ATOH1Q92858 354 aaPredicted RBP7.14□□□□□ -1.27
VIM-207ENST00000495528 SDF4Q9BRK5 362 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 C1QTNF3Q9BXJ4 246 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 C1orf112Q9NSG2 853 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 CDH22Q9UJ99 828 aa7.14□□□□□ -1.27
VIM-207ENST00000495528 NAP1L2Q9ULW6 460 aaPredicted RBP7.14□□□□□ -1.27
VIM-207ENST00000495528 HIDE1A8MVS5 230 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 DDX39AO00148 427 aaKnown RBP7.13□□□□□ -1.27
VIM-207ENST00000495528 PJA2O43164 708 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 TEX33O43247 280 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 TSPAN6O43657 245 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 SGTAO43765 313 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 RFPL1O75677 317 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 PBX3P40426 434 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 LIFRP42702 1097 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 SLC26A2P50443 739 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 AK2P54819 239 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 PGS1Q32NB8 556 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 DCAF17Q5H9S7 520 aaPredicted RBP7.13□□□□□ -1.27
VIM-207ENST00000495528 SWSAP1Q6NVH7 229 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 FAM228AQ86W67 206 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 CCDC60Q8IWA6 550 aaPredicted RBP7.13□□□□□ -1.27
VIM-207ENST00000495528 PRR18Q8N4B5 295 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 DCBLD1Q8N8Z6 715 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 MRPS27Q92552 414 aaKnown RBP7.13□□□□□ -1.27
VIM-207ENST00000495528 MVB12AQ96EY5 273 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 MRGPRX4Q96LA9 322 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 RIPOR3Q96MK2 946 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 CASD1Q96PB1 797 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 DMRTA2Q96SC8 542 aa7.13□□□□□ -1.27
VIM-207ENST00000495528 ELAC1Q9H777 363 aaKnown RBP7.13□□□□□ -1.27
VIM-207ENST00000495528 ATP6V0A4Q9HBG4 840 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms