RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	TTC17	Q96AE7	1141 aa		13.79	□□□□□ -0.2
RBM28-208	ENST00000495327	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.79	□□□□□ -0.2
RBM28-208	ENST00000495327	RTKN	Q9BST9	563 aa		13.79	□□□□□ -0.2
RBM28-208	ENST00000495327	ADAM33	Q9BZ11	813 aa		13.79	□□□□□ -0.2
RBM28-208	ENST00000495327	MKRN2	Q9H000	416 aa	Known RBP	13.79	□□□□□ -0.2
RBM28-208	ENST00000495327	FBRS	Q9HAH7	460 aa		13.79	□□□□□ -0.2
RBM28-208	ENST00000495327	PRDM16	Q9HAZ2	1276 aa		13.79	□□□□□ -0.2
RBM28-208	ENST00000495327	USP36	Q9P275	1121 aa	Known RBP	13.79	□□□□□ -0.2
RBM28-208	ENST00000495327	PLA2G4C	Q9UP65	541 aa		13.79	□□□□□ -0.2
RBM28-208	ENST00000495327	PCDH15	Q96QU1	1955 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327		A0A1B0GVM2	712 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	TCAF2	A6NFQ2	919 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	MAP3K13	O43283	966 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	CAVIN2	O95810	425 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	CHRNB2	P17787	502 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	PTMS	P20962	102 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	MMP8	P22894	467 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	HOXD12	P35452	270 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	DHPS	P49366	369 aa	Predicted RBP	13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	SULT1E1	P49888	294 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	ZNF165	P49910	485 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	GSC	P56915	257 aa	Predicted RBP	13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	CENPC	Q03188	943 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	NME3	Q13232	169 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	SLC12A1	Q13621	1099 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	CCDC6	Q16204	474 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	SLC25A52	Q3SY17	297 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	AASDH	Q4L235	1098 aa	Predicted RBP	13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	FNDC3B	Q53EP0	1204 aa	Known RBP	13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	FSCB	Q5H9T9	825 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	BNIPL	Q7Z465	357 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	CFAP52	Q8N1V2	620 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	KDM1B	Q8NB78	822 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	OR2T3	Q8NH03	318 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	CYB5D2	Q8WUJ1	264 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	CPA5	Q8WXQ8	436 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	RNF34	Q969K3	372 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	MYO19	Q96H55	970 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	SLC6A17	Q9H1V8	727 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	PIGV	Q9NUD9	493 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	ARHGEF38	Q9NXL2	777 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	COX16	Q9P0S2	106 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	TMEM59L	Q9UK28	342 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	INTS6	Q9UL03	887 aa	Known RBP	13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	CYP8B1	Q9UNU6	501 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	PAXBP1	Q9Y5B6	917 aa		13.78	□□□□□ -0.2
RBM28-208	ENST00000495327	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM28-208	ENST00000495327		H0Y626	953 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	SLC30A4	O14863	429 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	GDF9	O60383	454 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	MOCS3	O95396	460 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	F9	P00740	461 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	IGLV3-19	P01714	112 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	UNG	P13051	313 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	FLT3	P36888	993 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	CSK	P41240	450 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	PTGER3	P43115	390 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	CXCR3	P49682	368 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	FOXK2	Q01167	660 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	RPL6	Q02878	288 aa	Known RBP	13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	C5orf22	Q49AR2	442 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	C2CD6	Q53TS8	623 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	PITRM1	Q5JRX3	1037 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	LYSMD4	Q5XG99	296 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	FBXL22	Q6P050	247 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	ITIH6	Q6UXX5	1313 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	TMPRSS6	Q8IU80	811 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	TMEFF1	Q8IYR6	380 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	CCAR2	Q8N163	923 aa	Known RBP	13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	CHD5	Q8TDI0	1954 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	ERLEC1	Q96DZ1	483 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	SIPA1	Q96FS4	1042 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	SMOC1	Q9H4F8	434 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	CD93	Q9NPY3	652 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	RTN4	Q9NQC3	1192 aa	Known RBP	13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	EVL	Q9UI08	416 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	MYO6	Q9UM54	1294 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	HS3ST4	Q9Y661	456 aa		13.77	□□□□□ -0.21
RBM28-208	ENST00000495327	ADAMTS9	Q9P2N4	1935 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	GOLGA8S	H3BPF8	625 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	PAGE1	O75459	146 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	SRPRA	P08240	638 aa	Known RBP	13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	HLA-E	P13747	358 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	TFE3	P19532	575 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	ATXN1	P54253	815 aa	Known RBP	13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	OXCT1	P55809	520 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	RNASE9	P60153	205 aa	Known RBP	13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	DEUP1	Q05D60	604 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	PTP4A2	Q12974	167 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	AUH	Q13825	339 aa	Known RBP	13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	ARID5B	Q14865	1188 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	IQCB1	Q15051	598 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	PLEKHG6	Q3KR16	790 aa		13.76	□□□□□ -0.21
RBM28-208	ENST00000495327	TCEAL6	Q6IPX3	200 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms