RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PPP1R7Q15435 360 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 MS4A13Q5J8X5 152 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 RWDD4Q6NW29 188 aaKnown RBP14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 LEKR1Q6ZMV7 388 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 PDZD4Q76G19 769 aaPredicted RBP14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 BZW1Q7L1Q6 419 aaKnown RBP14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 GSTA5Q7RTV2 222 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 ZC3H18Q86VM9 953 aaKnown RBP14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 ARL14EPQ8N8R7 260 aaPredicted RBP14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 MAB21L3Q8N8X9 362 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 TBC1D31Q96DN5 1066 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 SLC22A12Q96S37 553 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 CYP2S1Q96SQ9 504 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 HINFPQ9BQA5 517 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 TRIM51Q9BSJ1 452 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 EPB41L5Q9HCM4 733 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 DNMT3BQ9UBC3 853 aaKnown RBP14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 CLUHO75153 1309 aa14.52□□□□□ -0.09
PDZRN3-210ENST00000492909 HELZP42694 1942 aaKnown RBP14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 CCDC195A0A1B0GUA6 201 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 ZSCAN5CA6NGD5 496 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 FGF10O15520 208 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 CKMP06732 381 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 RHOP08100 348 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 HOXC13P31276 330 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 SLC11A2P49281 568 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 GBE1Q04446 702 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 PAFAH1B3Q15102 231 aaKnown RBP14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 CCDC85BQ15834 202 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 LRRC31Q6UY01 552 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 SYDE1Q6ZW31 735 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 IFT20Q8IY31 132 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 GOLGA6L1Q8N7Z2 621 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 PPM1EQ8WY54 764 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 CAVIN3Q969G5 261 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 ZBTB9Q96C00 473 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 ERP44Q9BS26 406 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 CATSPERBQ9H7T0 1116 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 GKN1Q9NS71 199 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 SMPD4Q9NXE4 827 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 DTLQ9NZJ0 730 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 VANGL2Q9ULK5 521 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 NEU3Q9UQ49 428 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 MFHAS1Q9Y4C4 1052 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 NUP205Q92621 2012 aa14.51□□□□□ -0.09
PDZRN3-210ENST00000492909 TRAV19A0A0A6YYK7 116 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 H7C0C1 242 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 MFSD11O43934 449 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 ACSL4O60488 711 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 GJA1P17302 382 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 SERPINB6P35237 376 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 CCR2P41597 374 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 ATP5OP48047 213 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 SLC10A2Q12908 348 aaPredicted RBP14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 XRCC4Q13426 336 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 AUHQ13825 339 aaKnown RBP14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 EMBQ6PCB8 327 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 C14orf80Q86SX3 495 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 ALLCQ8N6M5 410 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 AZIN2Q96A70 460 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 ZNF707Q96C28 371 aaPredicted RBP14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 ZFRQ96KR1 1074 aaKnown RBP14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 GDAP1L1Q96MZ0 367 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 TMEM121Q9BTD3 319 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 ESYT3A0FGR9 886 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 GOLGA6BA6NDN3 693 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 SGK1O00141 431 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 MAP3K6O95382 1288 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 IVLP07476 585 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 IRF1P10914 325 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 DDX6P26196 483 aaKnown RBP eCLIP14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 CORO1AP31146 461 aaKnown RBP14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 SLC7A9P82251 487 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 KCNC3Q14003 757 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 ARHGAP15Q53QZ3 475 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 TCEAL5Q5H9L2 206 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 RAP1GAP2Q684P5 730 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 DARS2Q6PI48 645 aaKnown RBP14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 GRASPQ7Z6J2 395 aaPredicted RBP14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 CHSY1Q86X52 802 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 DENND1CQ8IV53 801 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 SHKBP1Q8TBC3 707 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 RSAD2Q8WXG1 361 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 OLFM3Q96PB7 478 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 PRMT1Q99873 361 aaKnown RBP14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 PIDD1Q9HB75 910 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 GDF3Q9NR23 364 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 PPARGC1AQ9UBK2 798 aaKnown RBP14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 RAD54BQ9Y620 910 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 CPQQ9Y646 472 aa14.5□□□□□ -0.09
PDZRN3-210ENST00000492909 PRUNE2Q8WUY3 3088 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 IGLV3-10A0A075B6K4 115 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 NRG2O14511 850 aaPredicted RBP14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 ZNF197O14709 1029 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 KLKB1P03952 638 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 PTK6Q13882 451 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 KCTD19Q17RG1 926 aaPredicted RBP14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 ARTNQ5T4W7 220 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 STXBP5Q5T5C0 1151 aa14.49□□□□□ -0.09
PDZRN3-210ENST00000492909 GPR158Q5T848 1215 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms