RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 CER1O95813 267 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 DNTTP04053 509 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 HNRNPDQ14103 355 aaKnown RBP16.28■□□□□ 0.2
SMPD4-220ENST00000491319 TRIP6Q15654 476 aaKnown RBP16.28■□□□□ 0.2
SMPD4-220ENST00000491319 MEA1Q16626 185 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 TTC31Q49AM3 519 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-220ENST00000491319 DCAF6Q58WW2 860 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 FSCBQ5H9T9 825 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 RAP1GAP2Q684P5 730 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 ZNF776Q68DI1 518 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-220ENST00000491319 CHCHD4Q8N4Q1 142 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 KDF1Q8NAX2 398 aaPredicted RBP16.28■□□□□ 0.2
SMPD4-220ENST00000491319 STK32AQ8WU08 396 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 TTC17Q96AE7 1141 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 MRGPRX3Q96LB0 322 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 BTBD1Q9H0C5 482 aa16.28■□□□□ 0.2
SMPD4-220ENST00000491319 CHD6Q8TD26 2715 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 SIN3BO75182 1162 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 FGFR1OPO95684 399 aaKnown RBP16.27■□□□□ 0.2
SMPD4-220ENST00000491319 TRUB2O95900 331 aaKnown RBP16.27■□□□□ 0.2
SMPD4-220ENST00000491319 IGLV3-25P01717 112 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 APOEP02649 317 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 SLC9A1P19634 815 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 MATKP42679 507 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 CTSOP43234 321 aaPredicted RBP16.27■□□□□ 0.2
SMPD4-220ENST00000491319 CSNK1EP49674 416 aaKnown RBP16.27■□□□□ 0.2
SMPD4-220ENST00000491319 ZBTB16Q05516 673 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 PDCLQ13371 301 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 CAMK4Q16566 473 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 ARHGAP44Q17R89 818 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 ZNF423Q2M1K9 1284 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 HLA-BQ31612 363 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 ZC3H12AQ5D1E8 599 aaKnown RBP16.27■□□□□ 0.2
SMPD4-220ENST00000491319 PITRM1Q5JRX3 1037 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 LAYNQ6UX15 382 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 BEND5Q7L4P6 421 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 ENOSF1Q7L5Y1 443 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 CHSY1Q86X52 802 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 CREBRFQ8IUR6 639 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 DHX40Q8IX18 779 aaKnown RBP16.27■□□□□ 0.2
SMPD4-220ENST00000491319 LGI2Q8N0V4 545 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 BIRC7Q96CA5 298 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 MED15Q96RN5 788 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 TRIM62Q9BVG3 475 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 RSPH9Q9H1X1 276 aaPredicted RBP16.27■□□□□ 0.2
SMPD4-220ENST00000491319 POPDC2Q9HBU9 364 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 SUN2Q9UH99 717 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 RWDD2AQ9UIY3 292 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 MSRB2Q9Y3D2 182 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 PCDHB9Q9Y5E1 797 aa16.27■□□□□ 0.2
SMPD4-220ENST00000491319 DOCK4Q8N1I0 1966 aa16.27■□□□□ 0.19
SMPD4-220ENST00000491319 FAM208BQ5VWN6 2430 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 TMEM8BA6NDV4 472 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 H0Y626 953 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 CBFA2T3O75081 653 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 FSBPO95073 299 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 TRIM16O95361 564 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 ASLP04424 464 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 FTH1P19P0C7X4 201 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 TACR2P21452 398 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 USP8P40818 1118 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 NUMBP49757 651 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 AFF3P51826 1226 aaKnown RBP16.26■□□□□ 0.19
SMPD4-220ENST00000491319 ST8SIA6P61647 398 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 YWHAZP63104 245 aaKnown RBP16.26■□□□□ 0.19
SMPD4-220ENST00000491319 TAF5Q15542 800 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 HNRNPA1L2Q32P51 320 aaKnown RBP16.26■□□□□ 0.19
SMPD4-220ENST00000491319 RAB44Q7Z6P3 723 aaPredicted RBP16.26■□□□□ 0.19
SMPD4-220ENST00000491319 TMEM110Q86TL2 294 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 ZCCHC14Q8WYQ9 949 aaKnown RBP16.26■□□□□ 0.19
SMPD4-220ENST00000491319 PABPC3Q9H361 631 aaKnown RBP16.26■□□□□ 0.19
SMPD4-220ENST00000491319 THAP9Q9H5L6 903 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 TM7SF3Q9NS93 570 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 KIAA1468Q9P260 1216 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 APEX2Q9UBZ4 518 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 SERGEFQ9UGK8 458 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 PCOLCE2Q9UKZ9 415 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 ERVW-1Q9UQF0 538 aa16.26■□□□□ 0.19
SMPD4-220ENST00000491319 GOLGA4Q13439 2230 aaKnown RBP16.25■□□□□ 0.19
SMPD4-220ENST00000491319 ZNF883P0CG24 379 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 RDXP35241 583 aaKnown RBP16.25■□□□□ 0.19
SMPD4-220ENST00000491319 KIF19Q2TAC6 998 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 IL27RAQ6UWB1 636 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 CIR1Q86X95 450 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-220ENST00000491319 PASD1Q8IV76 773 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 CCDC117Q8IWD4 279 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-220ENST00000491319 APCDD1Q8J025 514 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 PNPLA1Q8N8W4 532 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 SETD7Q8WTS6 366 aaKnown RBP16.25■□□□□ 0.19
SMPD4-220ENST00000491319 SHC3Q92529 594 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 BTN2A3PQ96KV6 586 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 CPXM1Q96SM3 734 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 FAM204AQ9H8W3 233 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 SGK2Q9HBY8 427 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 TM9SF3Q9HD45 589 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 AJAP1Q9UKB5 411 aaPredicted RBP16.25■□□□□ 0.19
SMPD4-220ENST00000491319 RALYQ9UKM9 306 aaKnown RBP16.25■□□□□ 0.19
SMPD4-220ENST00000491319 CEP83Q9Y592 693 aa16.25■□□□□ 0.19
SMPD4-220ENST00000491319 ITIH6Q6UXX5 1313 aa16.24■□□□□ 0.19
SMPD4-220ENST00000491319 ZZEF1O43149 2961 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms