RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 FOXQ1Q9C009 403 aa18.01■□□□□ 0.47
ERCC3-207ENST00000490062 ARHGEF4Q9NR80 690 aa18.01■□□□□ 0.47
ERCC3-207ENST00000490062 TMPRSS4Q9NRS4 437 aa18.01■□□□□ 0.47
ERCC3-207ENST00000490062 DNAJC17Q9NVM6 304 aaKnown RBP18.01■□□□□ 0.47
ERCC3-207ENST00000490062 PLK2Q9NYY3 685 aa18.01■□□□□ 0.47
ERCC3-207ENST00000490062 ZNF212Q9UDV6 495 aa18.01■□□□□ 0.47
ERCC3-207ENST00000490062 OR12D3Q9UGF7 316 aa18.01■□□□□ 0.47
ERCC3-207ENST00000490062 USP18Q9UMW8 372 aa18.01■□□□□ 0.47
ERCC3-207ENST00000490062 NEU3Q9UQ49 428 aa18.01■□□□□ 0.47
ERCC3-207ENST00000490062 MTF2Q9Y483 593 aaPredicted RBP18.01■□□□□ 0.47
ERCC3-207ENST00000490062 E9PAM4 449 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 TBL1XO60907 577 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 CLDN11O75508 207 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 LUC7L3O95232 432 aaKnown RBP18■□□□□ 0.47
ERCC3-207ENST00000490062 APODP05090 189 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 NUBP1P53384 320 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 CDH4P55283 916 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 OXCT1P55809 520 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 CCZ1BP86790 482 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 CCZ1P86791 482 aaPredicted RBP18■□□□□ 0.47
ERCC3-207ENST00000490062 SLC25A11Q02978 314 aaKnown RBP18■□□□□ 0.47
ERCC3-207ENST00000490062 MESP2Q0VG99 397 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 UBXN2BQ14CS0 331 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 EIF4HQ15056 248 aaKnown RBP18■□□□□ 0.47
ERCC3-207ENST00000490062 ERMARDQ5T6L9 678 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 LRRC31Q6UY01 552 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 NUDT18Q6ZVK8 323 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 FLCNQ8NFG4 579 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 WFIKKN2Q8TEU8 576 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 RPRD1AQ96P16 312 aaPredicted RBP18■□□□□ 0.47
ERCC3-207ENST00000490062 PEBP4Q96S96 227 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 SIK2Q9H0K1 926 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 CHRDQ9H2X0 955 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 VANGL2Q9ULK5 521 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 CLEC4EQ9ULY5 219 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 TBC1D30Q9Y2I9 924 aa18■□□□□ 0.47
ERCC3-207ENST00000490062 RCCD1A6NED2 376 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 CHURC1-FNTBB4DL54 471 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 K7EQS6 105 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 PRPSAP2O60256 369 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 HLA-FP30511 346 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 SLC1A1P43005 524 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 SLC12A1Q13621 1099 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 HSF5Q4G112 596 aaPredicted RBP17.99■□□□□ 0.47
ERCC3-207ENST00000490062 SCYL2Q6P3W7 929 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 ZNF662Q6ZS27 426 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 CCAR2Q8N163 923 aaKnown RBP17.99■□□□□ 0.47
ERCC3-207ENST00000490062 NAT16Q8N8M0 369 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 ACRBPQ8NEB7 543 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 BTBD6Q96KE9 485 aa17.99■□□□□ 0.47
ERCC3-207ENST00000490062 SNRNP25Q9BV90 132 aaKnown RBP17.99■□□□□ 0.47
ERCC3-207ENST00000490062 NDRG2Q9UN36 371 aaKnown RBP17.99■□□□□ 0.47
ERCC3-207ENST00000490062 ZNF318Q5VUA4 2279 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 WASH4PA8MWX3 477 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 TIMM44O43615 452 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 NRDCO43847 1150 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 LRIG2O94898 1065 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 EGFP01133 1207 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 IL1R2P27930 398 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 KIR2DL1P43626 348 aaPredicted RBP17.98■□□□□ 0.47
ERCC3-207ENST00000490062 HCAR3P49019 387 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 PLK1P53350 603 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 MRPS21P82921 87 aaKnown RBP17.98■□□□□ 0.47
ERCC3-207ENST00000490062 DMC1Q14565 340 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 E2F5Q15329 346 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 DPYSL2Q16555 572 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 POLNQ7Z5Q5 900 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 ANKS1BQ7Z6G8 1248 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 SETD3Q86TU7 594 aaPredicted RBP17.98■□□□□ 0.47
ERCC3-207ENST00000490062 MFN1Q8IWA4 741 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 CFAP52Q8N1V2 620 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 FAM71BQ8TC56 605 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 WFDC5Q8TCV5 224 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 ZYG11BQ9C0D3 744 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 LMAN1LQ9HAT1 526 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 AP4E1Q9UPM8 1137 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 ADGRG1Q9Y653 693 aa17.98■□□□□ 0.47
ERCC3-207ENST00000490062 CHD5Q8TDI0 1954 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 KMT2EQ8IZD2 1858 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 FAM72CH0Y354 149 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 NPC1O15118 1278 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 TRIM24O15164 1050 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 PI15O43692 258 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 HNRNPLP14866 589 aaKnown RBP eCLIP17.97■□□□□ 0.47
ERCC3-207ENST00000490062 RHOQP17081 205 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 GGCXP38435 758 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 HADHQ16836 314 aaKnown RBP17.97■□□□□ 0.47
ERCC3-207ENST00000490062 FAM72AQ5TYM5 149 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 LRRC38Q5VT99 294 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 FAM72DQ6L9T8 149 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 CXorf57Q6NSI4 855 aaKnown RBP17.97■□□□□ 0.47
ERCC3-207ENST00000490062 C11orf63Q6NUN7 778 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 ZNF783Q6ZMS7 281 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 NLRP14Q86W24 1093 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 FAM72BQ86X60 149 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 AHI1Q8N157 1196 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 TMEM105Q8N8V8 129 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 BHMTQ93088 406 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 TBC1D31Q96DN5 1066 aa17.97■□□□□ 0.47
ERCC3-207ENST00000490062 PPP1R9BQ96SB3 815 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms