RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PPP1R16AQ96I34 528 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 PI4K2AQ9BTU6 479 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 KIAA1683Q9H0B3 1180 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 IL1RL2Q9HB29 575 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 RSL24D1Q9UHA3 163 aaKnown RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 SPATA31A5Q5VU36 1347 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 SPATA31A7Q8IWB4 1347 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 SLC37A4O43826 429 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 MSCO60682 206 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 HMBSP08397 361 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 IRF1P10914 325 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 THPOP40225 353 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 RHOAP61586 193 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 ANGPT1Q15389 498 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 TBCELQ5QJ74 424 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 MTSS1LQ765P7 747 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 SPRTNQ9H040 489 aaPredicted RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 MUC13Q9H3R2 512 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 ABCC13Q9NSE7 274 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 TTLL13PA6NNM8 815 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 CAPN15O75808 1086 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 TFE3P19532 575 aaPredicted RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 YWHAZP63104 245 aaKnown RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 FASTKQ14296 549 aaKnown RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 SLC27A1Q6PCB7 646 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 TXNDC11Q6PKC3 985 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 LRRC74BQ6ZQY2 392 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 EPS8L3Q8TE67 593 aaKnown RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 PCYOX1Q9UHG3 505 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 NAALADL1Q9UQQ1 740 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 NR5A2O00482 541 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 CABYRO75952 493 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 MBL2P11226 248 aaPredicted RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 DGKAP23743 735 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 GPR15P49685 360 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 PARP6Q2NL67 630 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 NET1Q7Z628 596 aaPredicted RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 ACOT1Q86TX2 421 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 DEPDC4Q8N2C3 294 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 S100ZQ8WXG8 99 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 SLC5A5Q92911 643 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 CCDC3Q9BQI4 270 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 BIRC5O15392 142 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 ASNA1O43681 348 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 EPN2O95208 641 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 CYP3A4P08684 503 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 NEK3P51956 506 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 PSMC6P62333 389 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 NKAPQ8N5F7 415 aaKnown RBP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 SNX6Q9UNH7 406 aa9.03□□□□□ -0.96
LSAMP-205ENST00000490035 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.03□□□□□ -0.96
LSAMP-205ENST00000490035 ACKR2O00590 384 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 CKMP06732 381 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 ATP6V1B2P21281 511 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 TRAF2Q12933 501 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 ITGADQ13349 1161 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 RFX4Q33E94 735 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 AGKQ53H12 422 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 PAGE2Q7Z2X7 111 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 PEG10Q86TG7 708 aaKnown RBP9.02□□□□□ -0.96
LSAMP-205ENST00000490035 SLC47A2Q86VL8 602 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 PROX1Q92786 737 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 C18orf25Q96B23 403 aaPredicted RBP9.02□□□□□ -0.96
LSAMP-205ENST00000490035 A1CFQ9NQ94 594 aaKnown RBP9.02□□□□□ -0.96
LSAMP-205ENST00000490035 GDF3Q9NR23 364 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 VPS28Q9UK41 221 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 KCNH1O95259 989 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 ATP6V1B1P15313 513 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 MEA1Q16626 185 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 CTXN3Q4LDR2 81 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 TMEM119Q4V9L6 283 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 C10orf53Q8N6V4 93 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 OR2W6PQ8NHA6 318 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 ZFP28Q8NHY6 868 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 ACTL9Q8TC94 416 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 CCDC28BQ9BUN5 200 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 FAM126AQ9BYI3 521 aaPredicted RBP9.02□□□□□ -0.96
LSAMP-205ENST00000490035 KLHL31Q9H511 634 aa9.02□□□□□ -0.96
LSAMP-205ENST00000490035 RBM22Q9NW64 420 aaKnown RBP eCLIP9.02□□□□□ -0.96
LSAMP-205ENST00000490035 AKAP7Q9P0M2 348 aaPredicted RBP9.02□□□□□ -0.96
LSAMP-205ENST00000490035 ZBTB14O43829 449 aa9.02□□□□□ -0.97
LSAMP-205ENST00000490035 ATP6V1G2O95670 118 aa9.02□□□□□ -0.97
LSAMP-205ENST00000490035 ITGAVP06756 1048 aa9.02□□□□□ -0.97
LSAMP-205ENST00000490035 PPIBP23284 216 aaKnown RBP9.02□□□□□ -0.97
LSAMP-205ENST00000490035 PRKCIP41743 596 aa9.02□□□□□ -0.97
LSAMP-205ENST00000490035 TBX4P57082 545 aa9.02□□□□□ -0.97
LSAMP-205ENST00000490035 RIPPLY1Q0D2K3 151 aa9.02□□□□□ -0.97
LSAMP-205ENST00000490035 SEC23AQ15436 765 aa9.02□□□□□ -0.97
LSAMP-205ENST00000490035 KIF2BQ8N4N8 673 aa9.02□□□□□ -0.97
LSAMP-205ENST00000490035 FBXO25Q8TCJ0 367 aa9.02□□□□□ -0.97
LSAMP-205ENST00000490035 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
LSAMP-205ENST00000490035 CRNNQ9UBG3 495 aaPredicted RBP9.02□□□□□ -0.97
LSAMP-205ENST00000490035 ARIH1Q9Y4X5 557 aaPredicted RBP9.02□□□□□ -0.97
LSAMP-205ENST00000490035 RBM47A0AV96 593 aaKnown RBP9.02□□□□□ -0.97
LSAMP-205ENST00000490035 WBP4O75554 376 aaKnown RBP9.02□□□□□ -0.97
LSAMP-205ENST00000490035 ATG7O95352 703 aa9.02□□□□□ -0.97
LSAMP-205ENST00000490035 LDOC1O95751 146 aaPredicted RBP9.02□□□□□ -0.97
LSAMP-205ENST00000490035 GSTM1P09488 218 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms