RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 SHC2P98077 582 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 GAD2Q05329 585 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 AAK1Q2M2I8 961 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 COBLL1Q53SF7 1204 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 TTC39AQ5SRH9 613 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 RBM23Q86U06 439 aaKnown RBP3.49□□□□□ -1.85
CPSF3-205ENST00000489629 ANKRD13AQ8IZ07 590 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 CLEC18CQ8NCF0 446 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 SRFBP1Q8NEF9 429 aaKnown RBP3.49□□□□□ -1.85
CPSF3-205ENST00000489629 MCRS1Q96EZ8 462 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 FAM84BQ96KN1 310 aaPredicted RBP3.49□□□□□ -1.85
CPSF3-205ENST00000489629 MEIS3Q99687 375 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 TASP1Q9H6P5 420 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 TXNRD2Q9NNW7 524 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 KLHL42Q9P2K6 505 aa3.49□□□□□ -1.85
CPSF3-205ENST00000489629 TCF20Q9UGU0 1960 aaKnown RBP3.49□□□□□ -1.85
CPSF3-205ENST00000489629 PNMA6EA0A0J9YXQ4 647 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 RPS10-NUDT3A0A1W2PQS6 291 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 GAGE12JA6NER3 117 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 M0QYT0 321 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 APAF1O14727 1248 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 PCDH17O14917 1159 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 PMM2O15305 246 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 NEURL1O76050 574 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 KLKB1P03952 638 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 MLH1P40692 756 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 FOXL2P58012 376 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 LTBQ06643 244 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 IFIT5Q13325 482 aaKnown RBP3.48□□□□□ -1.85
CPSF3-205ENST00000489629 GRM4Q14833 912 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 SAFBQ15424 915 aaKnown RBP eCLIP3.48□□□□□ -1.85
CPSF3-205ENST00000489629 ASIC2Q16515 512 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 FAM209BQ5JX69 171 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 Q5PR19 223 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 WASHC2DQ5SRD0 308 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 PARM1Q6UWI2 310 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 TRILQ7L0X0 811 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 DPP9Q86TI2 863 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 SPATA2LQ8IUW3 424 aaPredicted RBP3.48□□□□□ -1.85
CPSF3-205ENST00000489629 NEUROG1Q92886 237 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 ATP2A3Q93084 1043 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 FAR2Q96K12 515 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 SF3B5Q9BWJ5 86 aaKnown RBP3.48□□□□□ -1.85
CPSF3-205ENST00000489629 ISCUQ9H1K1 167 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 NECTIN3Q9NQS3 549 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 HELLSQ9NRZ9 838 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.48□□□□□ -1.85
CPSF3-205ENST00000489629 ZNF112Q9UJU3 913 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 ICKQ9UPZ9 632 aa3.48□□□□□ -1.85
CPSF3-205ENST00000489629 KCNJ18B7U540 433 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 PODXLO00592 558 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 NFATC1O95644 943 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 CER1O95813 267 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 GLP2RO95838 553 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 ANXA6P08133 673 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 TRIM27P14373 513 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 TNFSF4P23510 183 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 EEF1GP26641 437 aaKnown RBP3.47□□□□□ -1.85
CPSF3-205ENST00000489629 TM4SF4P48230 202 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 RASSF2P50749 326 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 TLE3Q04726 772 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 SLC4A8Q2Y0W8 1093 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 DGKKQ5KSL6 1271 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 HMBOX1Q6NT76 420 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 Q6ZTC4 211 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 CYB5R4Q7L1T6 521 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 RTL10Q7L3V2 364 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 KDELC2Q7Z4H8 507 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 MDGA2Q7Z553 956 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 TTC30AQ86WT1 665 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 ADPRHL1Q8NDY3 354 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 NUDCD2Q8WVJ2 157 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 SFXN1Q9H9B4 322 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 PLAC1Q9HBJ0 212 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 CD93Q9NPY3 652 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 TM7SF3Q9NS93 570 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 PLK2Q9NYY3 685 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 SLC8A2Q9UPR5 921 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 INSL5Q9Y5Q6 135 aa3.47□□□□□ -1.85
CPSF3-205ENST00000489629 CYP3A7-CYP3A51PA0A087WV96 503 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 CYP3A4P08684 503 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 ALDOCP09972 364 aaKnown RBP3.46□□□□□ -1.86
CPSF3-205ENST00000489629 CYP3A7P24462 503 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 TAS2R50P59544 299 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 RPL15P61313 204 aaKnown RBP3.46□□□□□ -1.86
CPSF3-205ENST00000489629 EGR4Q05215 589 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 KEAP1Q14145 624 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 RAB30Q15771 203 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 INO80DQ53TQ3 878 aaPredicted RBP3.46□□□□□ -1.86
CPSF3-205ENST00000489629 ENTPD8Q5MY95 495 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 ARL6IP4Q66PJ3 421 aaKnown RBP3.46□□□□□ -1.86
CPSF3-205ENST00000489629 CTU1Q7Z7A3 348 aaKnown RBP3.46□□□□□ -1.86
CPSF3-205ENST00000489629 TRABD2AQ86V40 505 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 C7orf57Q8NEG2 295 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 ELP5Q8TE02 316 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 ZNF566Q969W8 418 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 MED30Q96HR3 178 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 RIPOR3Q96MK2 946 aa3.46□□□□□ -1.86
CPSF3-205ENST00000489629 MAGEH1Q9H213 219 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms