RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ALDH7A1P49419 539 aaKnown RBP8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 GATMP50440 423 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 CLCN5P51795 746 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 CASP5P51878 434 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 ITGA1P56199 1179 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 OSTNP61366 133 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 ROM1Q03395 351 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 ITKQ08881 620 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 GRIK3Q13003 919 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 STIM1Q13586 685 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 CAVIN1Q6NZI2 390 aaKnown RBP8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 ARMCX5Q6P1M9 558 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 LIPIQ6XZB0 460 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 LHFPL2Q6ZUX7 228 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 RASSF3Q86WH2 238 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 NELFCDQ8IXH7 590 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 NOC3LQ8WTT2 800 aaKnown RBP8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZBTB45Q96K62 511 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 C16orf92Q96LL3 132 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZSWIM3Q96MP5 696 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZNF558Q96NG5 402 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 RPF1Q9H9Y2 349 aaKnown RBP8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 TYW1Q9NV66 732 aaKnown RBP8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 GALNT8Q9NY28 637 aa8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 USP36Q9P275 1121 aaKnown RBP8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 AGO2Q9UKV8 859 aaKnown RBP8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 BARX2Q9UMQ3 279 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC12-221ENST00000489032 A0A0B4J269 797 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 FSD2A1L4K1 749 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 ANKRD63C9JTQ0 380 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 XPOTO43592 962 aaKnown RBP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 CALUO43852 315 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZC3H11AO75152 810 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 APOL3O95236 402 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 POMCP01189 267 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 ALDH2P05091 517 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 THP07101 528 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 MC4RP32245 332 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 PPM1AP35813 382 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 RAP1GAPP47736 663 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 NRIP1P48552 1158 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 SCNN1GP51170 649 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 KRT17Q04695 432 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 STK4Q13043 487 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 KNOP1Q1ED39 458 aaKnown RBP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 BMT2Q1RMZ1 405 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZSCAN23Q3MJ62 389 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZNF648Q5T619 568 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 ZNF658Q5TYW1 1059 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 PRAMEF9Q5VWM5 478 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 EPM2AIP1Q7L775 607 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 PROSER1Q86XN7 944 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 CILP2Q8IUL8 1156 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 CD302Q8IX05 232 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 DTX3Q8N9I9 347 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 BHLHE22Q8NFJ8 381 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 GPT2Q8TD30 523 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 SCFD1Q8WVM8 642 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 PWWP2AQ96N64 755 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 TSPAN18Q96SJ8 248 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 TMEM175Q9BSA9 504 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 FGFBP2Q9BYJ0 223 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 NUP62CLQ9H1M0 184 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 PLEKHA5Q9HAU0 1116 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 KIAA1586Q9HCI6 787 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 SLC38A7Q9NVC3 462 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 TBC1D13Q9NVG8 400 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 PUF60Q9UHX1 559 aaKnown RBP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 SMG5Q9UPR3 1016 aaKnown RBP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 SORCS3Q9UPU3 1222 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 KCTD3Q9Y597 815 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 STYXL1Q9Y6J8 313 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 EP300Q09472 2414 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 CHD8Q9HCK8 2581 aa8.63□□□□□ -1.03
TRAPPC12-221ENST00000489032 FRYLO94915 3013 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 PDXKO00764 312 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 INPPL1O15357 1258 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 EXTL3O43909 919 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 C1QTNF9P0C862 333 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 PI3P19957 117 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 OR1G1P47890 313 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 BCAR1P56945 870 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 POU5F1Q01860 360 aaKnown RBP8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 SLC6A3Q01959 620 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 ACAP1Q15027 740 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 ANGPT1Q15389 498 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 SURF1Q15526 300 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 CAMK4Q16566 473 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 CCDC183Q5T5S1 534 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 ESRP1Q6NXG1 681 aaKnown RBP8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 SLC39A4Q6P5W5 647 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 ESPNLQ6ZVH7 1005 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 ADGRD2Q7Z7M1 963 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 FAM129CQ86XR2 697 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 GPD1LQ8N335 351 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 GUF1Q8N442 669 aaKnown RBP8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 TRIML1Q8N9V2 468 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 COLGALT1Q8NBJ5 622 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 KIAA0895Q8NCT3 520 aa8.62□□□□□ -1.03
TRAPPC12-221ENST00000489032 SUSD6Q92537 303 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms