RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 JADE1Q6IE81 842 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 CASC4Q6P4E1 433 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 LRRC8BQ6P9F7 803 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 CATSPERGQ6ZRH7 1159 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 CDR2LQ86X02 465 aaPredicted RBP20.01■□□□□ 0.79
HMG20B-213ENST00000488973 MICALL2Q8IY33 904 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 HIPK4Q8NE63 616 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 BRD8Q9H0E9 1235 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 TMEM216Q9P0N5 145 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 SLC17A6Q9P2U8 582 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 PSMD13Q9UNM6 376 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 DTNAQ9Y4J8 743 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 C15orf38-AP3S2A0A0A6YYH1 394 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 LOC100653049A0A140TA62 436 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 A6NJR5 290 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 INO80B-WBP1J3KQ70 363 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 TXNDC9O14530 226 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 KRT34O76011 436 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 ALDH1A3P47895 512 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 CLCN2P51788 898 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 NDST1P52848 882 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 SLC6A3Q01959 620 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 SNAPC2Q13487 334 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 DPYSL2Q16555 572 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 ARPINQ7Z6K5 226 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 TMEM130Q8N3G9 435 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 PHTF2Q8N3S3 785 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 TTC39CQ8N584 583 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 DGCR14Q96DF8 476 aaKnown RBP20.01■□□□□ 0.79
HMG20B-213ENST00000488973 INO80BQ9C086 356 aaPredicted RBP20.01■□□□□ 0.79
HMG20B-213ENST00000488973 IFT122Q9HBG6 1241 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 INPP5FQ9Y2H2 1132 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 PCDHB12Q9Y5F1 795 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 CDY2AQ9Y6F7 541 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 CDY1Q9Y6F8 540 aa20.01■□□□□ 0.79
HMG20B-213ENST00000488973 IDO1P14902 403 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 PGAM1P18669 254 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 RGS2P41220 211 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 HDAC4P56524 1084 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 BTG3Q14201 252 aaPredicted RBP20■□□□□ 0.79
HMG20B-213ENST00000488973 CCDC153Q494R4 210 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 METTL21CQ5VZV1 264 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 EPGNQ6UW88 154 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 TMC7Q7Z402 723 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 AFG1LQ8WV93 481 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 KHSRPQ92945 711 aaKnown RBP eCLIP20■□□□□ 0.79
HMG20B-213ENST00000488973 HPDLQ96IR7 371 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 CORO1BQ9BR76 489 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 NAT9Q9BTE0 207 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 ZBTB42B2RXF5 422 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 C19orf81C9J6K1 198 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 DCXO43602 365 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 SMIM18P0DKX4 95 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 PTPRAP18433 802 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 KLF10Q13118 480 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 HACE1Q8IYU2 909 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 PQLC1Q8N2U9 271 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 TRPV5Q9NQA5 729 aa20■□□□□ 0.79
HMG20B-213ENST00000488973 EVPLQ92817 2033 aa19.99■□□□□ 0.79
HMG20B-213ENST00000488973 CPA3P15088 417 aa19.99■□□□□ 0.79
HMG20B-213ENST00000488973 RGS7P49802 495 aa19.99■□□□□ 0.79
HMG20B-213ENST00000488973 CHST13Q8NET6 341 aa19.99■□□□□ 0.79
HMG20B-213ENST00000488973 CLMNQ96JQ2 1002 aa19.99■□□□□ 0.79
HMG20B-213ENST00000488973 PRICKLE1Q96MT3 831 aaPredicted RBP19.99■□□□□ 0.79
HMG20B-213ENST00000488973 Q9H521 79 aa19.99■□□□□ 0.79
HMG20B-213ENST00000488973 COG4Q9H9E3 785 aa19.99■□□□□ 0.79
HMG20B-213ENST00000488973 EIF2B3Q9NR50 452 aaKnown RBP19.99■□□□□ 0.79
HMG20B-213ENST00000488973 GTF2IRD1Q9UHL9 959 aa19.99■□□□□ 0.79
HMG20B-213ENST00000488973 ITGB1BP2Q9UKP3 347 aa19.99■□□□□ 0.79
HMG20B-213ENST00000488973 A0A0A0MRY4 1105 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 TYK2P29597 1187 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 GARSP41250 739 aaKnown RBP19.98■□□□□ 0.79
HMG20B-213ENST00000488973 RPL5P46777 297 aaKnown RBP19.98■□□□□ 0.79
HMG20B-213ENST00000488973 METTL7BQ6UX53 244 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 TMEM126BQ8IUX1 230 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 HTR3CQ8WXA8 447 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 ARNTL2Q8WYA1 636 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 HIC2Q96JB3 615 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 SPATA13Q96N96 652 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 GCNAQ96QF7 691 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 NT5C1AQ9BXI3 368 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 SLC4A5Q9BY07 1137 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 CDH19Q9H159 772 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 HOXC10Q9NYD6 342 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 UTP6Q9NYH9 597 aaKnown RBP19.98■□□□□ 0.79
HMG20B-213ENST00000488973 HESX1Q9UBX0 185 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 STK39Q9UEW8 545 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 PRPF19Q9UMS4 504 aaKnown RBP19.98■□□□□ 0.79
HMG20B-213ENST00000488973 PSAT1Q9Y617 370 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 CAPN8A6NHC0 703 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 GPR25O00155 361 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 ZBTB14O43829 449 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 STAG3L1P0CL83 205 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 MBTD1Q05BQ5 628 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 PEX6Q13608 980 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 TLR1Q15399 786 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 GOLGA7BQ2TAP0 167 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 PPM1JQ5JR12 505 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 PMF1Q6P1K2 205 aa19.98■□□□□ 0.79
HMG20B-213ENST00000488973 SAMD7Q7Z3H4 446 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms