RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 ALDH1A2O94788 518 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 RTN3O95197 1032 aaPredicted RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 ASMTLO95671 621 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 APOEP02649 317 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SRGAP2BP0DMP2 458 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 HAPLN1P10915 354 aaPredicted RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SLC2A3P11169 496 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 KRT15P19012 456 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 CCNCP24863 283 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 YWHAQP27348 245 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 STX2P32856 288 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 CD68P34810 354 aaPredicted RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SERPINB6P35237 376 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 GARSP41250 739 aaKnown RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 ATN1P54259 1190 aaPredicted RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 CCL23P55773 120 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 USP46P62068 366 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 COG7P83436 770 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 IFRD2Q12894 506 aaPredicted RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 EFTUD2Q15029 972 aaKnown RBP eCLIP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 LRRC14Q15048 493 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 KBTBD12Q3ZCT8 623 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 TEX44Q53QW1 395 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 RTP2Q5QGT7 225 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 GKAP1Q5VSY0 366 aaPredicted RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 AFMIDQ63HM1 303 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 STEAP4Q687X5 459 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 NUGGCQ68CJ6 796 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 KCTD11Q693B1 232 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 ZNF280DQ6N043 979 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 FUT10Q6P4F1 479 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 RNF19BQ6ZMZ0 732 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 UNC5AQ6ZN44 842 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 ANKS3Q6ZW76 656 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 YTHDF3Q7Z739 585 aaKnown RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SLC26A11Q86WA9 606 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 CCNJLQ8IV13 435 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 ARHGAP12Q8IWW6 846 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 KLHDC8BQ8IXV7 354 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 MPP5Q8N3R9 675 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 LZTR1Q8N653 840 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 ANKRD42Q8N9B4 389 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 ZNF784Q8NCA9 323 aaPredicted RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SPPL2BQ8TCT7 592 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 MGARPQ8TDB4 240 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 C2orf15Q8WU43 125 aaKnown RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 BCL7CQ8WUZ0 217 aaPredicted RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 HDAC11Q96DB2 347 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 VWCEQ96DN2 955 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 CFAP36Q96G28 342 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 OXNAD1Q96HP4 312 aaPredicted RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SCLYQ96I15 445 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SEC16BQ96JE7 1060 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 B3GALT6Q96L58 329 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 FCRL2Q96LA5 508 aaPredicted RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 TEKT5Q96M29 485 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 MAGEB18Q96M61 343 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 PGLYRP2Q96PD5 576 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SMC6Q96SB8 1091 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 GORASP1Q9BQQ3 440 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 TTPALQ9BTX7 342 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 MRPL9Q9BYD2 267 aaKnown RBP6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 CRISPLD2Q9H0B8 497 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SIK2Q9H0K1 926 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 HIPK3Q9H422 1215 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SMYD2Q9NRG4 433 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 NKIRAS1Q9NYS0 192 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SEPT10Q9P0V9 454 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 ZNF180Q9UJW8 692 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 TLR6Q9Y2C9 796 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 SLC27A5Q9Y2P5 690 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 PCDHA11Q9Y5I1 949 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 FRMPD3Q5JV73 1810 aa6.92□□□□□ -1.3
RN7SL561P-201ENST00000488553 IQANK1A0A1B0GTG1 560 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 MTMR11A4FU01 709 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 DRGXA6NNA5 263 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 ERI2A8K979 691 aaKnown RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 CXorf49A8MYA2 514 aaPredicted RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 NT5C1B-RDH14C9J2C7 533 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 FGF10O15520 208 aaPredicted RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 PSMD3O43242 534 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 MSI1O43347 362 aaKnown RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 MAFKO60675 156 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 PIAS1O75925 651 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 AP2A1O95782 977 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 MYCP01106 439 aaPredicted RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 JCHAINP01591 159 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 MT-ND3P03897 115 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 VIMP08670 466 aaKnown RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 ZDHHC11BP0C7U3 371 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 KRT4P19013 534 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 TAC1P20366 129 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 PSMB4P28070 264 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 FOXN2P32314 431 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 RPA3P35244 121 aaPredicted RBP6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 IFNAR2P48551 515 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 NPY2RP49146 381 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 PSEN1P49768 467 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 TUBP50607 506 aa6.91□□□□□ -1.3
RN7SL561P-201ENST00000488553 ARPP19P56211 112 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms