RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 FAM189A1O60320 539 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 FBXO21O94952 628 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ENO1P06733 434 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 SERPINA6P08185 405 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 C6orf222P0C671 652 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ATP6V1B1P15313 513 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 KRT15P19012 456 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 COMTP21964 271 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 RRM1P23921 792 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ACAT1P24752 427 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 CAP2P40123 477 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 IL6STP40189 918 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC1A1P43005 524 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ACADSBP45954 432 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 KCNJ1P48048 391 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 C21orf59P57076 290 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 TXNL4AP83876 142 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 OVGP1Q12889 678 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 E2F2Q14209 437 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 PSMD6Q15008 389 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 LRRC41Q15345 812 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 CNGA3Q16281 694 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 GRAMD1BQ3KR37 738 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 HYIQ5T013 277 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 RARS2Q5T160 578 aaKnown RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 SPTY2D1Q68D10 685 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 NANOGP8Q6NSW7 305 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 FDX2Q6P4F2 183 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 RFX8Q6ZV50 586 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 LSMEM2Q8N112 164 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 CCDC33Q8N5R6 958 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 MAGEB6Q8N7X4 407 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 TERB1Q8NA31 727 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ZNF420Q8TAQ5 688 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 TBC1D15Q8TC07 691 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ADAMTS16Q8TE57 1224 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC35C1Q96A29 364 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 CEP95Q96GE4 821 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 C9orf72Q96LT7 481 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 GCNAQ96QF7 691 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ISCA1Q9BUE6 129 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 NUF2Q9BZD4 464 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 GPR88Q9GZN0 384 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 HIPK3Q9H422 1215 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 RETREG1Q9H6L5 497 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ACSS3Q9H6R3 686 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 BARHL2Q9NY43 387 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 TMOD2Q9NZR1 351 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ARMCX1Q9P291 453 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 EPS15L1Q9UBC2 864 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 RIMS3Q9UJD0 308 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ITGA11Q9UKX5 1188 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 ZNF214Q9UL59 606 aaPredicted RBP4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 IFT52Q9Y366 437 aa4.9□□□□□ -1.63
CDC42BPA-213ENST00000488131 BAZ2AQ9UIF9 1905 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 TRIM64A6NGJ6 449 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 C9IYK1 514 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 F5H6K3 240 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC22A1O15245 554 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 FARP2O94887 1054 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 ZBTB11O95625 1053 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 CST3P01034 146 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 TFPTP0C1Z6 253 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 KRT4P19013 534 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 ABCB4P21439 1286 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 FGFR2P21802 821 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 NR2F2P24468 414 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 KLRC2P26717 231 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 ADSSP30520 456 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 HOXD13P35453 343 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 PHKA1P46020 1223 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 CPA2P48052 419 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 MXI1P50539 228 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC5A3P53794 718 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 DLG4P78352 724 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 STX3Q13277 289 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 OXA1LQ15070 435 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 CYTH1Q15438 398 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC15A2Q16348 729 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 CCNG2Q16589 344 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 MOGQ16653 247 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 BMT2Q1RMZ1 405 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 LRRC36Q1X8D7 754 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 RGS21Q2M5E4 152 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 CCDC14Q49A88 953 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 KCTD21Q4G0X4 260 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 HSF5Q4G112 596 aaPredicted RBP4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 METTL24Q5JXM2 366 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 MEX3CQ5U5Q3 659 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 ANKRD34AQ69YU3 496 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 VHLLQ6RSH7 139 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 FASTKD5Q7L8L6 764 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 EEPD1Q7L9B9 569 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 NEK8Q86SG6 692 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 AMIGO2Q86SJ2 522 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 MMAAQ8IVH4 418 aaKnown RBP4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 PPM1KQ8N3J5 372 aa4.89□□□□□ -1.63
CDC42BPA-213ENST00000488131 SLC25A41Q8N5S1 370 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms