RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.78□□□□□ -1.64
SMC4-219ENST00000487747 ISCUQ9H1K1 167 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 KCNK9Q9NPC2 374 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 FBXO28Q9NVF7 368 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 FAM50BQ9Y247 325 aa4.78□□□□□ -1.64
SMC4-219ENST00000487747 GXYLT2A0PJZ3 443 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 CXorf65A6NEN9 183 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 PODXLO00592 558 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 PAPSS2O95340 614 aaPredicted RBP4.77□□□□□ -1.65
SMC4-219ENST00000487747 TRAF1Q13077 416 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 PMS2P11Q13670 270 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 KEAP1Q14145 624 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 MAPKAPK3Q16644 382 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 HIBCHQ6NVY1 386 aaPredicted RBP4.77□□□□□ -1.65
SMC4-219ENST00000487747 SKAP1Q86WV1 359 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 IP6K1Q92551 441 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 CLMNQ96JQ2 1002 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 VPS33BQ9H267 617 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 MDFICQ9P1T7 246 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 SLC8A2Q9UPR5 921 aa4.77□□□□□ -1.65
SMC4-219ENST00000487747 LMTK3Q96Q04 1460 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 A0A1B0GVT2 93 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 INAFM1C9JVW0 142 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 FGF3P11487 239 aaPredicted RBP4.76□□□□□ -1.65
SMC4-219ENST00000487747 HARSP12081 509 aaKnown RBP4.76□□□□□ -1.65
SMC4-219ENST00000487747 TGM2P21980 687 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 NSUN2Q08J23 767 aaKnown RBP eCLIP4.76□□□□□ -1.65
SMC4-219ENST00000487747 ARL13BQ3SXY8 428 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 PARM1Q6UWI2 310 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 SLC39A5Q6ZMH5 540 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 NR2C2APQ86WQ0 139 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 DGKHQ86XP1 1220 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 TXLNBQ8N3L3 684 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 LMO3Q8TAP4 145 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 PMM1Q92871 262 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 PAAF1Q9BRP4 392 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 COLEC11Q9BWP8 271 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 EPS8L2Q9H6S3 715 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 FBXO4Q9UKT5 387 aa4.76□□□□□ -1.65
SMC4-219ENST00000487747 UBE2J1Q9Y385 318 aaPredicted RBP4.76□□□□□ -1.65
SMC4-219ENST00000487747 DOCK7Q96N67 2140 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 PNMA6EA0A0J9YXQ4 647 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 NCK2O43639 380 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 CER1O95813 267 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 DSCR9P59020 149 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 CBFBQ13951 182 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 GRM4Q14833 912 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 ENTPD8Q5MY95 495 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 Q5PR19 223 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 TTC39AQ5SRH9 613 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 Q6ZTK2 550 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 CYB5R4Q7L1T6 521 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 RASGRP3Q8IV61 690 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 SRFBP1Q8NEF9 429 aaKnown RBP4.75□□□□□ -1.65
SMC4-219ENST00000487747 TTC17Q96AE7 1141 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 OSBPL5Q9H0X9 879 aaPredicted RBP4.75□□□□□ -1.65
SMC4-219ENST00000487747 TASP1Q9H6P5 420 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 PLAC1Q9HBJ0 212 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 TXNRD2Q9NNW7 524 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 PLK2Q9NYY3 685 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 MYO6Q9UM54 1294 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 DTNAQ9Y4J8 743 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 PTGDR2Q9Y5Y4 395 aa4.75□□□□□ -1.65
SMC4-219ENST00000487747 LOC105369274A0A096LPK9 316 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 LOC102723532A0A0G2JNH3 316 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 LOC105371045A0A1W2PR82 267 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 CLEC18AA5D8T8 446 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 PCDH17O14917 1159 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 RGS14O43566 566 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 NEURL1O76050 574 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 LCATP04180 440 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 ALDOCP09972 364 aaKnown RBP4.74□□□□□ -1.65
SMC4-219ENST00000487747 IDEP14735 1019 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 CPA1P15085 419 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 ENTPD1P49961 510 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 PDLIM4P50479 330 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 POLE2P56282 527 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 EGR4Q05215 589 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 AAK1Q2M2I8 961 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 SLC35G1Q2M3R5 365 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 DGKKQ5KSL6 1271 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 ANKRD40Q6AI12 368 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 PDXDC1Q6P996 788 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 SLC16A12Q6ZSM3 486 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 KDELC2Q7Z4H8 507 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 MDGA2Q7Z553 956 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 OR4N4Q8N0Y3 316 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 ZBTB8BQ8NAP8 495 aaPredicted RBP4.74□□□□□ -1.65
SMC4-219ENST00000487747 CLEC18CQ8NCF0 446 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 ELP5Q8TE02 316 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 ZNF419Q96HQ0 510 aaPredicted RBP4.74□□□□□ -1.65
SMC4-219ENST00000487747 SLITRK1Q96PX8 696 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 CD93Q9NPY3 652 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 TBC1D14Q9P2M4 693 aa4.74□□□□□ -1.65
SMC4-219ENST00000487747 A0A087WYN8 130 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 I6L893 689 aaPredicted RBP4.73□□□□□ -1.65
SMC4-219ENST00000487747 ACOT8O14734 319 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 NKX2-8O15522 239 aa4.73□□□□□ -1.65
SMC4-219ENST00000487747 PCYT1AP49585 367 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms