RNA–Protein interactions for RNA: ENST00000486728.5

TNFRSF18-204, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-204ENST00000486728 MYL5Q02045 173 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 ZBTB16Q05516 673 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 GFPT1Q06210 699 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 EIF4EBP2Q13542 120 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 NCAPHQ15003 741 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 TTC39BQ5VTQ0 682 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 OLFML1Q6UWY5 402 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 RGL4Q8IZJ4 473 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 CARNMT1Q8N4J0 409 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 DEFB119Q8N690 84 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 TMEM35BQ8NCS4 154 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 CYB5D2Q8WUJ1 264 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 RNF34Q969K3 372 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 TOE1Q96GM8 510 aaKnown RBP20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 NUP58Q9BVL2 599 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 FAM207AQ9NSI2 230 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 WSB2Q9NYS7 404 aaPredicted RBP20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 COX16Q9P0S2 106 aa20.36■□□□□ 0.85
TNFRSF18-204ENST00000486728 MEI4A8MW99 385 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 F5H5T6 163 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 H0Y626 953 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 LUC7L3O95232 432 aaKnown RBP20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 IGLV3-19P01714 112 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 SYPP08247 313 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 ENGP17813 658 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 TPMTP51580 245 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 OXCT1P55809 520 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 POLR2FP61218 127 aaKnown RBP20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 SLC6A3Q01959 620 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 SLC26A9Q7LBE3 791 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 SLC41A1Q8IVJ1 513 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 KDM1BQ8NB78 822 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 MSANTD4Q8NCY6 345 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 TTC17Q96AE7 1141 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 PCED1AQ9H1Q7 454 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 NLRC4Q9NPP4 1024 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 DDIT4Q9NX09 232 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 RRN3Q9NYV6 651 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 KIAA1522Q9P206 1035 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 LIMA1Q9UHB6 759 aaKnown RBP20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 SIK3Q9Y2K2 1263 aa20.35■□□□□ 0.85
TNFRSF18-204ENST00000486728 KCNU1A8MYU2 1149 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 CDX4O14627 284 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 DAB1O75553 588 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 GFPT2O94808 682 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 KCNK5O95279 499 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 MMEP08473 750 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 HLA-EP13747 358 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 TACR2P21452 398 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 CDH5P33151 784 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 TYRO3Q06418 890 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 SFSWAPQ12872 951 aaKnown RBP20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 PTPRNQ16849 979 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 TTC31Q49AM3 519 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 C2CD6Q53TS8 623 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 RABGAP1LQ5R372 815 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 FKBP15Q5T1M5 1219 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 RAP1GAP2Q684P5 730 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 LGI2Q8N0V4 545 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 ZNF366Q8N895 744 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 ZNF397Q8NF99 534 aaPredicted RBP20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 SLC20A1Q8WUM9 679 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 LMLNQ96KR4 655 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 ADAM33Q9BZ11 813 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 DAAM1Q9Y4D1 1078 aa20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 NYNRINQ9P2P1 1898 aaKnown RBP20.34■□□□□ 0.85
TNFRSF18-204ENST00000486728 PI4KAP42356 2102 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 DNTTP04053 509 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 C7P10643 843 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 ZNF18P17022 549 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 NOS2P35228 1153 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 SLC12A1Q13621 1099 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 SYCP1Q15431 976 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 FSCBQ5H9T9 825 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 APTXQ7Z2E3 356 aaKnown RBP20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 HDDC3Q8N4P3 179 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 AOPEPQ8N6M6 819 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 ANKRD20A12PQ8NF67 263 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 EPS8L1Q8TE68 723 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 PPP1R9BQ96SB3 815 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 GPR174Q9BXC1 333 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 CAPN10Q9HC96 672 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 STAP1Q9ULZ2 295 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 PAXBP1Q9Y5B6 917 aa20.33■□□□□ 0.85
TNFRSF18-204ENST00000486728 NCOR2Q9Y618 2525 aa20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 RNASEH1O60930 286 aaKnown RBP20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 LSM8O95777 96 aaKnown RBP20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 SRPRAP08240 638 aaKnown RBP20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 TFE3P19532 575 aaPredicted RBP20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 CDK11BP21127 795 aaKnown RBP20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 CSRP1P21291 193 aaKnown RBP20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 SCNN1AP37088 669 aa20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 CSKP41240 450 aa20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 MAPK8P45983 427 aa20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 NOVA1P51513 510 aaKnown RBP20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 JAM2P57087 298 aa20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 RNASE9P60153 205 aaKnown RBP20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 NME3Q13232 169 aa20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 UAP1L1Q3KQV9 507 aa20.32■□□□□ 0.84
TNFRSF18-204ENST00000486728 ANO6Q4KMQ2 910 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms