RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ECHS1P30084 290 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 CDH5P33151 784 aaPredicted RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 COILP38432 576 aaPredicted RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 ACOT2P49753 483 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 ZNF132P52740 706 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 SOX10P56693 466 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 FKBP1BP68106 108 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 IFFO1Q0D2I5 559 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 BYSLQ13895 437 aaKnown RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 PIGHQ14442 188 aaPredicted RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 PLCB4Q15147 1175 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 FAM153CQ494X1 144 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 CEP85LQ5SZL2 805 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 TLDC1Q6P9B6 456 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 CCDC62Q6P9F0 684 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 LILRA6Q6PI73 481 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 TMEM270Q6UE05 265 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 MICALCLQ6ZW33 695 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 FKBP9P1Q75LS8 142 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 TRMT10CQ7L0Y3 403 aaKnown RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 MON1BQ7L1V2 547 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 C1QL4Q86Z23 238 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 CCDC105Q8IYK2 499 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 KATNAL2Q8IYT4 538 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 RCOR2Q8IZ40 523 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 PRELID2Q8N945 189 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 MFSD2AQ8NA29 543 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 GPRC5AQ8NFJ5 357 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 NLGN2Q8NFZ4 835 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 EXD1Q8NHP7 514 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 RSPH1Q8WYR4 309 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 PPP1R14AQ96A00 147 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 CDCA5Q96FF9 252 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 SCLYQ96I15 445 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 CCDC74BQ96LY2 380 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 ROPN1BQ9BZX4 212 aaPredicted RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 WDR12Q9GZL7 423 aaKnown RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 PABPC3Q9H361 631 aaKnown RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 ASB7Q9H672 318 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 ROPN1Q9HAT0 212 aaPredicted RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 CYP3A43Q9HB55 503 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 TOPORSQ9NS56 1045 aaPredicted RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 MKS1Q9NXB0 559 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 RNF181Q9P0P0 153 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 PDP2Q9P2J9 529 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 WDR35Q9P2L0 1181 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 ANKFY1Q9P2R3 1169 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 RBPJLQ9UBG7 517 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 FAM153AQ9UHL3 310 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 GGA2Q9UJY4 613 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 CPSF3Q9UKF6 684 aaKnown RBP8.06□□□□□ -1.12
SNX13-208ENST00000482558 KIAA1257Q9ULG3 409 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 GPR52Q9Y2T5 361 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 U3KQE9 123 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 SBF1O95248 1867 aa8.06□□□□□ -1.12
SNX13-208ENST00000482558 TCRBV16S1A1N1A0A5B0 115 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 ERICH4A6NGS2 130 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 TMEM110-MUSTN1A8MSY1 372 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 M0R3H8 397 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 PQBP1O60828 265 aaKnown RBP8.05□□□□□ -1.12
SNX13-208ENST00000482558 TMCC2O75069 709 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 GH1P01241 217 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 HRGP04196 525 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 ITGAVP06756 1048 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 WEE2P0C1S8 567 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 TXNP10599 105 aaKnown RBP8.05□□□□□ -1.12
SNX13-208ENST00000482558 CETPP11597 493 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 RARGP13631 454 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 CAPN3P20807 821 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 MMP8P22894 467 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 AKAP5P24588 427 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 ATP5DP30049 168 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 PTPN7P35236 360 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 PMS2P54278 862 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 HNRNPH2P55795 449 aaKnown RBP8.05□□□□□ -1.12
SNX13-208ENST00000482558 SNX16P57768 344 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 NOMO3P69849 1222 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 ADCY2Q08462 1091 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 PRKG1Q13976 671 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 ODF1Q14990 250 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 ACAP1Q15027 740 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 PPP1R7Q15435 360 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 STILQ15468 1287 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 KCNMB1Q16558 191 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 CCNG2Q16589 344 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 DNAJC21Q5F1R6 531 aaKnown RBP8.05□□□□□ -1.12
SNX13-208ENST00000482558 ATF7IP2Q5U623 682 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 DENND2CQ68D51 928 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 ZCCHC8Q6NZY4 707 aaKnown RBP8.05□□□□□ -1.12
SNX13-208ENST00000482558 DRICH1Q6PGQ1 229 aaPredicted RBP8.05□□□□□ -1.12
SNX13-208ENST00000482558 ZNF227Q86WZ6 799 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 NKAIN3Q8N8D7 197 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 RNF149Q8NC42 400 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 FEZF2Q8TBJ5 459 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 BTN2A2Q8WVV5 523 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 UBLCP1Q8WVY7 318 aaPredicted RBP8.05□□□□□ -1.12
SNX13-208ENST00000482558 OPTNQ96CV9 577 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 PGM2Q96G03 612 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 FAM193BQ96PV7 902 aaPredicted RBP8.05□□□□□ -1.12
SNX13-208ENST00000482558 NCAPGQ9BPX3 1015 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms