RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 SLC6A17Q9H1V8 727 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 PIGVQ9NUD9 493 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 KIAA1522Q9P206 1035 aaPredicted RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 CYP8B1Q9UNU6 501 aa12.29□□□□□ -0.44
HMGN1-213ENST00000482192 RIF1Q5UIP0 2472 aaKnown RBP12.29□□□□□ -0.44
HMGN1-213ENST00000482192 IGHV1OR15-9A0A0B4J2B8 117 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 A0A1B0GVM2 712 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 SYCE3A1L190 88 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 TCAF2A6NFQ2 919 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 GOLGA8SH3BPF8 625 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 PAGE1O75459 146 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 MOCS3O95396 460 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 ASLP04424 464 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 CCDC172P0C7W6 258 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 CSKP41240 450 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 DPP6P42658 865 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 CXCR3P49682 368 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 CAMK2GQ13555 558 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-213ENST00000482192 AUHQ13825 339 aaKnown RBP12.28□□□□□ -0.44
HMGN1-213ENST00000482192 SF3A2Q15428 464 aaKnown RBP12.28□□□□□ -0.44
HMGN1-213ENST00000482192 FILIP1LQ4L180 1135 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 FSCBQ5H9T9 825 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 BRMS1LQ5PSV4 323 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 LYSMD4Q5XG99 296 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 ERMP1Q7Z2K6 904 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 TMPRSS6Q8IU80 811 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 PRCCQ92733 491 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-213ENST00000482192 TTC17Q96AE7 1141 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 RPRD1AQ96P16 312 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-213ENST00000482192 FUCA2Q9BTY2 467 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 WDCPQ9H6R7 721 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 FBRSQ9HAH7 460 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 RTN4Q9NQC3 1192 aaKnown RBP12.28□□□□□ -0.44
HMGN1-213ENST00000482192 TMEM59LQ9UK28 342 aa12.28□□□□□ -0.44
HMGN1-213ENST00000482192 MUC22E2RYF6 1773 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-213ENST00000482192 EP300Q09472 2414 aaPredicted RBP12.27□□□□□ -0.44
HMGN1-213ENST00000482192 NDUFS2O75306 463 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 UNGP13051 313 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-213ENST00000482192 HLA-EP13747 358 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 FERP16591 822 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 TFE3P19532 575 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-213ENST00000482192 FLT3P36888 993 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 PTGER3P43115 390 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 NSFP46459 744 aaKnown RBP12.27□□□□□ -0.45
HMGN1-213ENST00000482192 COPAP53621 1224 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 OXCT1P55809 520 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 ST8SIA6P61647 398 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 CENPCQ03188 943 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 DEUP1Q05D60 604 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 SLC12A1Q13621 1099 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 PITRM1Q5JRX3 1037 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 ACBD5Q5T8D3 534 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-213ENST00000482192 FBXL22Q6P050 247 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 ARMCX6Q7L4S7 300 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 DGLUCYQ7Z3D6 616 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 CCAR2Q8N163 923 aaKnown RBP12.27□□□□□ -0.45
HMGN1-213ENST00000482192 KDM1BQ8NB78 822 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 OR2T3Q8NH03 318 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 SLC30A5Q8TAD4 765 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 PIGKQ92643 395 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 SIPA1Q96FS4 1042 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 TBCBQ99426 244 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 C11orf70Q9BRQ4 267 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 RTKNQ9BST9 563 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 TKTL2Q9H0I9 626 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 SMOC1Q9H4F8 434 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 ITM2CQ9NQX7 267 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 METTL5Q9NRN9 209 aaKnown RBP12.27□□□□□ -0.45
HMGN1-213ENST00000482192 ARHGEF38Q9NXL2 777 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 USP36Q9P275 1121 aaKnown RBP12.27□□□□□ -0.45
HMGN1-213ENST00000482192 INTS6Q9UL03 887 aaKnown RBP12.27□□□□□ -0.45
HMGN1-213ENST00000482192 VANGL2Q9ULK5 521 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 MYO6Q9UM54 1294 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 HS3ST4Q9Y661 456 aa12.27□□□□□ -0.45
HMGN1-213ENST00000482192 PTPRZ1P23471 2315 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-213ENST00000482192 A0A1W2PQC6 194 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 SLC30A4O14863 429 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 KHNYNO15037 678 aaKnown RBP12.26□□□□□ -0.45
HMGN1-213ENST00000482192 TEX33O43247 280 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 GDF9O60383 454 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 ADCY5O95622 1261 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 IGLV3-19P01714 112 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 SRPRAP08240 638 aaKnown RBP12.26□□□□□ -0.45
HMGN1-213ENST00000482192 ACADMP11310 421 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 CD6P30203 668 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 OXTRP30559 389 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 RDXP35241 583 aaKnown RBP12.26□□□□□ -0.45
HMGN1-213ENST00000482192 HOXD12P35452 270 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 TPMTP51580 245 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 LIMK1P53667 647 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 TPM4P67936 248 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 IQCB1Q15051 598 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 CLEC16AQ2KHT3 1053 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 PLEKHG6Q3KR16 790 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 RNF219Q5W0B1 726 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-213ENST00000482192 TCEAL6Q6IPX3 200 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 CIR1Q86X95 450 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-213ENST00000482192 CACUL1Q86Y37 369 aa12.26□□□□□ -0.45
HMGN1-213ENST00000482192 PHF13Q86YI8 300 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms