RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 IRF1P10914 325 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 SLC6A4P31645 630 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 VCPP55072 806 aaKnown RBP12.88□□□□□ -0.35
IFT88-206ENST00000482172 BYSLQ13895 437 aaKnown RBP12.88□□□□□ -0.35
IFT88-206ENST00000482172 OASLQ15646 514 aaKnown RBP12.88□□□□□ -0.35
IFT88-206ENST00000482172 RABGAP1LQ5R372 815 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 RWDD4Q6NW29 188 aaKnown RBP12.88□□□□□ -0.35
IFT88-206ENST00000482172 SYDE1Q6ZW31 735 aaPredicted RBP12.88□□□□□ -0.35
IFT88-206ENST00000482172 NLRP14Q86W24 1093 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 KLHL7Q8IXQ5 586 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 RTL3Q8N8U3 475 aaKnown RBP12.88□□□□□ -0.35
IFT88-206ENST00000482172 ITFG1Q8TB96 612 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 USP13Q92995 863 aaPredicted RBP12.88□□□□□ -0.35
IFT88-206ENST00000482172 WBP2Q969T9 261 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
IFT88-206ENST00000482172 RIPOR3Q96MK2 946 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 BRD8Q9H0E9 1235 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 ETNK2Q9NVF9 386 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 TMEM248Q9NWD8 314 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 CFAP97Q9P2B7 532 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 VANGL2Q9ULK5 521 aa12.88□□□□□ -0.35
IFT88-206ENST00000482172 HELZP42694 1942 aaKnown RBP12.88□□□□□ -0.35
IFT88-206ENST00000482172 CHD9Q3L8U1 2897 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 FAM187AA6NFU0 413 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 HACD1B0YJ81 288 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 GFRA2O00451 464 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 TBX10O75333 385 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 PECAM1P16284 738 aaPredicted RBP12.87□□□□□ -0.35
IFT88-206ENST00000482172 MX2P20592 715 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 STIP1P31948 543 aaKnown RBP12.87□□□□□ -0.35
IFT88-206ENST00000482172 CHKAP35790 457 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 GGCXP38435 758 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 MTHFRP42898 656 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 MAPKAPK2P49137 400 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 EIF3EP60228 445 aaKnown RBP12.87□□□□□ -0.35
IFT88-206ENST00000482172 USP4Q13107 963 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 TEX35Q5T0J7 233 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 C8orf74Q6P047 294 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 TTC27Q6P3X3 843 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 C1orf228Q6PIY5 440 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 CHST9Q7L1S5 443 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 LRRC49Q8IUZ0 686 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 ARID3BQ8IVW6 561 aaPredicted RBP12.87□□□□□ -0.35
IFT88-206ENST00000482172 NPAS3Q8IXF0 933 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 CCDC105Q8IYK2 499 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 LGI2Q8N0V4 545 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 CELF5Q8N6W0 485 aaKnown RBP12.87□□□□□ -0.35
IFT88-206ENST00000482172 SH3RF2Q8TEC5 729 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 ATG4AQ8WYN0 398 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 RUBCNQ92622 972 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 IGSF8Q969P0 613 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 HAUS1Q96CS2 278 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 MSLNLQ96KJ4 702 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 ZSWIM3Q96MP5 696 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 RPRD1AQ96P16 312 aaPredicted RBP12.87□□□□□ -0.35
IFT88-206ENST00000482172 OLFM3Q96PB7 478 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 LRRC1Q9BTT6 524 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 CLDND1Q9NY35 253 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 OBP2AQ9NY56 170 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 DTLQ9NZJ0 730 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 TBC1D14Q9P2M4 693 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 SAE1Q9UBE0 346 aaPredicted RBP12.87□□□□□ -0.35
IFT88-206ENST00000482172 AMACRQ9UHK6 382 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 DNPEPQ9ULA0 475 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 HEY1Q9Y5J3 304 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 ZFP37Q9Y6Q3 630 aaPredicted RBP12.87□□□□□ -0.35
IFT88-206ENST00000482172 C2orf16Q68DN1 1984 aa12.87□□□□□ -0.35
IFT88-206ENST00000482172 DOCK6Q96HP0 2047 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 GOLGA6L7A0A1B0GV03 622 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 BCLAF3A2AJT9 711 aaKnown RBP12.86□□□□□ -0.35
IFT88-206ENST00000482172 TARSL2A2RTX5 802 aaKnown RBP12.86□□□□□ -0.35
IFT88-206ENST00000482172 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 ECEL1O95672 775 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 RBP3P10745 1247 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 IGFBP4P22692 258 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 LTBRP36941 435 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 PTGIRP43119 386 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 NDST2P52849 883 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 CDH4P55283 916 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 DR1Q01658 176 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 GBE1Q04446 702 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 ZNF33AQ06730 810 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 SLC10A2Q12908 348 aaPredicted RBP12.86□□□□□ -0.35
IFT88-206ENST00000482172 SNX1Q13596 522 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 PDK1Q15118 436 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 ZNF77Q15935 545 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 MPP7Q5T2T1 576 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 AFMIDQ63HM1 303 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 UMODL1-AS1Q8N2C9 162 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 ZSCAN18Q8TBC5 510 aaPredicted RBP12.86□□□□□ -0.35
IFT88-206ENST00000482172 ING5Q8WYH8 240 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 FGF13Q92913 245 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 E2F7Q96AV8 911 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 OTUB2Q96DC9 234 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 NECTIN4Q96NY8 510 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 KLC2Q9H0B6 622 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 TRPV4Q9HBA0 871 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 MPP6Q9NZW5 540 aa12.86□□□□□ -0.35
IFT88-206ENST00000482172 ZNF212Q9UDV6 495 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms