RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 SLC9B1Q4ZJI4 515 aa7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 ZNF648Q5T619 568 aaPredicted RBP7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 CAND1Q86VP6 1230 aaKnown RBP7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 D2HGDHQ8N465 521 aa7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 NCSTNQ92542 709 aa7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 SAP30LQ9HAJ7 183 aa7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 ERVK-5Q9HDB9 667 aa7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 RNF181Q9P0P0 153 aa7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 KCNE5Q9UJ90 142 aa7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 ZNF112Q9UJU3 913 aa7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 PCDHB2Q9Y5E7 798 aa7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 CDK12Q9NYV4 1490 aaPredicted RBP7.97□□□□□ -1.13
GAPVD1-217ENST00000479511 CNTLNQ9NXG0 1405 aa7.96□□□□□ -1.13
GAPVD1-217ENST00000479511 TCOF1Q13428 1488 aaKnown RBP7.96□□□□□ -1.13
GAPVD1-217ENST00000479511 SIGLEC1Q9BZZ2 1709 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 GOLGA6L10A0A0M3HER8 536 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 SPRY2O43597 315 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 BSGP35613 385 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 UBA7P41226 1012 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 GARSP41250 739 aaKnown RBP7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 HNRNPMP52272 730 aaKnown RBP eCLIP7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 PPP2CBP62714 309 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 PPP2CAP67775 309 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 CDK18Q07002 472 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 EPS8Q12929 822 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 STK4Q13043 487 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 CYP2A13Q16696 494 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 FAM187BQ17R55 369 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 SH2D4BQ5SQS7 431 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 ACSM6Q6P461 480 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 DPY19L3Q6ZPD9 716 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 MAVSQ7Z434 540 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 C17orf53Q8N3J3 647 aaPredicted RBP7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 ATP2A3Q93084 1043 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 FEM1CQ96JP0 617 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 CD180Q99467 661 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 NPAS1Q99742 590 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 DPCDQ9BVM2 203 aaPredicted RBP7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 ACTRT3Q9BYD9 372 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 SIL1Q9H173 461 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 TRIM36Q9NQ86 728 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 SUFUQ9UMX1 484 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 CHST2Q9Y4C5 530 aa7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 RNF17Q9BXT8 1623 aaKnown RBP7.96□□□□□ -1.14
GAPVD1-217ENST00000479511 EEA1Q15075 1411 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 A0A1W2PQM1 296 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 TEX22C9J3V5 150 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 MUSKO15146 869 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 LDLRAD4O15165 306 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 NOBOXO60393 691 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 CCNDBP1O95273 360 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 RARGP13631 454 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 ARSAP15289 507 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 JUNBP17275 347 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 NNMTP40261 264 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 MVDP53602 400 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 CXADRP78310 365 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 TLE3Q04726 772 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 KIAA2012Q0VF49 1180 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 LRMPQ12912 555 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 ST3GAL2Q16842 350 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 NAIF1Q69YI7 327 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 ARHGEF18Q6ZSZ5 1173 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 PLEKHH3Q7Z736 793 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 FAM124AQ86V42 546 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 P3H2Q8IVL5 708 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 TMEM132CQ8N3T6 1108 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 CTHRC1Q96CG8 243 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 MNTQ99583 582 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 HCN3Q9P1Z3 774 aa7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 ZHX1Q9UKY1 873 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 COPG1Q9Y678 874 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-217ENST00000479511 ABCA8O94911 1581 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 FAM170AA1A519 330 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 A1L4Q6 167 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 NPIPB13A6NJU9 1138 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 NPIPB5A8MRT5 1133 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 A8MVJ9 347 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 NPIPB4C9JG80 1138 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 GPR42O15529 346 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 RPS6KA4O75676 772 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 HSPA4LO95757 839 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 KRT1P04264 644 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 MED14OSP0DP75 135 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 ABCD1P33897 745 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 AFF3P51826 1226 aaKnown RBP7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 SLURP1P55000 103 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 RUNDC3AQ59EK9 446 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 NAA16Q6N069 864 aaPredicted RBP7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 MTHFD1LQ6UB35 978 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 HTR3DQ70Z44 454 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 PRPF39Q86UA1 669 aaKnown RBP7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 VSIG1Q86XK7 387 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 TEX11Q8IYF3 940 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 TAGAPQ8N103 731 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 LINC01356Q8N9X3 169 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 KCTD6Q8NC69 237 aa7.94□□□□□ -1.14
GAPVD1-217ENST00000479511 SCFD2Q8WU76 684 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms