RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 E4F1Q66K89 784 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-212ENST00000478616 CXorf57Q6NSI4 855 aaKnown RBP19.41■□□□□ 0.7
SREBF1-212ENST00000478616 ARMCX6Q7L4S7 300 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 CHSY1Q86X52 802 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 ZNF677Q86XU0 584 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 ZDHHC17Q8IUH5 632 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 MFN1Q8IWA4 741 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 APCDD1Q8J025 514 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 AHI1Q8N157 1196 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 PGBD3Q8N328 593 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 CARNMT1Q8N4J0 409 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 DEFB119Q8N690 84 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 SLC30A5Q8TAD4 765 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 ALG14Q96F25 216 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 PGAP3Q96FM1 320 aaPredicted RBP19.41■□□□□ 0.7
SREBF1-212ENST00000478616 ARHGEF38Q9NXL2 777 aa19.41■□□□□ 0.7
SREBF1-212ENST00000478616 USP36Q9P275 1121 aaKnown RBP19.41■□□□□ 0.7
SREBF1-212ENST00000478616 ASCC3Q8N3C0 2202 aaKnown RBP19.41■□□□□ 0.7
SREBF1-212ENST00000478616 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-212ENST00000478616 TCRBV5S1A1TA0A578 114 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 TM4SF5O14894 197 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 NPC1O15118 1278 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 TIMM44O43615 452 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 PAGE1O75459 146 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 DLDP09622 509 aaKnown RBP19.4■□□□□ 0.7
SREBF1-212ENST00000478616 CSKP41240 450 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 NUMBP49757 651 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 RNASE9P60153 205 aaKnown RBP19.4■□□□□ 0.7
SREBF1-212ENST00000478616 NME3Q13232 169 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 AUHQ13825 339 aaKnown RBP19.4■□□□□ 0.7
SREBF1-212ENST00000478616 ELF2Q15723 593 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 KLHL40Q2TBA0 621 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 FAM102AQ5T9C2 384 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-212ENST00000478616 PEAR1Q5VY43 1037 aaPredicted RBP19.4■□□□□ 0.7
SREBF1-212ENST00000478616 SDE2Q6IQ49 451 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 PHLDB2Q86SQ0 1253 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 METTL3Q86U44 580 aaKnown RBP19.4■□□□□ 0.7
SREBF1-212ENST00000478616 EMC1Q8N766 993 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 JOSD2Q8TAC2 188 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.4■□□□□ 0.7
SREBF1-212ENST00000478616 DAAM1Q9Y4D1 1078 aa19.4■□□□□ 0.7
SREBF1-212ENST00000478616 SYCE3A1L190 88 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 PRR5-ARHGAP8B1AHC4 643 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 GOLGA8SH3BPF8 625 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 MZF1P28698 734 aaPredicted RBP19.39■□□□□ 0.69
SREBF1-212ENST00000478616 CCR1P32246 355 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 STAT1P42224 750 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 ARHGAP8P85298 464 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 PITRM1Q5JRX3 1037 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 SH3PXD2AQ5TCZ1 1133 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 IRF2BP2Q7Z5L9 587 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 C11orf74Q86VG3 221 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 TMPRSS6Q8IU80 811 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 CCAR2Q8N163 923 aaKnown RBP19.39■□□□□ 0.69
SREBF1-212ENST00000478616 ATP6V0D2Q8N8Y2 350 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 NEK11Q8NG66 645 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 UCMAQ8WVF2 138 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 SYNCQ9H7C4 482 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 PRSS16Q9NQE7 514 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 ITM2CQ9NQX7 267 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 VPS45Q9NRW7 570 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 ZNF212Q9UDV6 495 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 CEP83Q9Y592 693 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 OR51B4Q9Y5P0 310 aa19.39■□□□□ 0.69
SREBF1-212ENST00000478616 ATXN2Q99700 1313 aaKnown RBP19.39■□□□□ 0.69
SREBF1-212ENST00000478616 SLC30A4O14863 429 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 CNTN5O94779 1100 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 ENDOD1O94919 500 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 CAVIN2O95810 425 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 IGLV3-19P01714 112 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 EPHX1P07099 455 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 CDK11BP21127 795 aaKnown RBP19.38■□□□□ 0.69
SREBF1-212ENST00000478616 ITPKAP23677 461 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 DHPSP49366 369 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-212ENST00000478616 SULT1E1P49888 294 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 ZNF165P49910 485 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 PUM1Q14671 1186 aaKnown RBP eCLIP19.38■□□□□ 0.69
SREBF1-212ENST00000478616 CLEC16AQ2KHT3 1053 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 PLEKHG6Q3KR16 790 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 SLC25A52Q3SY17 297 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 SERPINA13PQ6UXR4 307 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 CACUL1Q86Y37 369 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 CFAP57Q96MR6 1250 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 DDX50Q9BQ39 737 aaKnown RBP19.38■□□□□ 0.69
SREBF1-212ENST00000478616 C11orf70Q9BRQ4 267 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 MAGEB5Q9BZ81 275 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 TTYH3Q9C0H2 523 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 PDCL3Q9H2J4 239 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 PRDM16Q9HAZ2 1276 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 METTL5Q9NRN9 209 aaKnown RBP19.38■□□□□ 0.69
SREBF1-212ENST00000478616 WSB2Q9NYS7 404 aaPredicted RBP19.38■□□□□ 0.69
SREBF1-212ENST00000478616 SLCO3A1Q9UIG8 710 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 PILRBQ9UKJ0 227 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 VANGL2Q9ULK5 521 aa19.38■□□□□ 0.69
SREBF1-212ENST00000478616 DOCK9Q9BZ29 2069 aa19.37■□□□□ 0.69
SREBF1-212ENST00000478616 A0A1B0GTH6 734 aa19.37■□□□□ 0.69
SREBF1-212ENST00000478616 MED19A0JLT2 244 aaPredicted RBP19.37■□□□□ 0.69
SREBF1-212ENST00000478616 LNP1A1A4G5 178 aa19.37■□□□□ 0.69
SREBF1-212ENST00000478616 F5H5T6 163 aa19.37■□□□□ 0.69
SREBF1-212ENST00000478616 TPMTP51580 245 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms