RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 MARK2Q7KZI7 788 aaKnown RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 LRRC8DQ7L1W4 858 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 C16orf59Q7L2K0 433 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 PLPPR4Q7Z2D5 763 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 BNIPLQ7Z465 357 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 MFN1Q8IWA4 741 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 KLHDC8BQ8IXV7 354 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 EXOC8Q8IYI6 725 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 ADGRF2Q8IZF7 708 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 DEPTORQ8TB45 409 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 SCG3Q8WXD2 468 aaKnown RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 TMEM143Q96AN5 459 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 SPATA33Q96N06 139 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 SRPK1Q96SB4 655 aaKnown RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 KCTD15Q96SI1 283 aaPredicted RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 MCMBPQ9BTE3 642 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 OSBPL1AQ9BXW6 950 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 C20orf27Q9GZN8 174 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 NMUR2Q9GZQ4 415 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 NRBP2Q9NSY0 501 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 KLHL11Q9NVR0 708 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 CXXC1Q9P0U4 656 aaPredicted RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 TJP2Q9UDY2 1190 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 XPO7Q9UIA9 1087 aaKnown RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 USP18Q9UMW8 372 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.08□□□□□ -1.28
UBR4-212ENST00000475973 MAP4K5Q9Y4K4 846 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 PCDHA11Q9Y5I1 949 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 COL4A4P53420 1690 aaPredicted RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 A0A088AWK7 358 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 KLHL33A6NCF5 533 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 MAGEA13PA6NCF6 341 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 GRXCR1A8MXD5 290 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 CXorf49A8MYA2 514 aaPredicted RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 PDLIM1O00151 329 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 MCF2LO15068 1137 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 GYG2O15488 501 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 PEX1O43933 1283 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 EFCAB14O75071 495 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 KRT37O76014 449 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 IL18RAPO95256 599 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 APOEP02649 317 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 IQCF3P0C7M6 154 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 ZNF286BP0CG31 522 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 SETSIPP0DME0 302 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 MYL2P10916 166 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 VDRP11473 427 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 NEFHP12036 1026 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 SELPP16109 830 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 CYP3A5P20815 502 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 BGNP21810 368 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 PRDX6P30041 224 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 RPIAP49247 311 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 HARS2P49590 506 aaKnown RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 ADCY1Q08828 1119 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 NIPAL4Q0D2K0 466 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 MXD4Q14582 209 aaPredicted RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 MTERF2Q49AM1 385 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 DNAL1Q4LDG9 190 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 BOLA3Q53S33 107 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 CELF3Q5SZQ8 465 aaKnown RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 ATG16L1Q676U5 607 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 GDF6Q6KF10 455 aaPredicted RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 MPZL3Q6UWV2 235 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 RNF111Q6ZNA4 994 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 LIMS2Q7Z4I7 341 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 TMEM110Q86TL2 294 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 TTC7BQ86TV6 843 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 NT5DC4Q86YG4 428 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 PALM2Q8IXS6 379 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 ARHGAP24Q8N264 748 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 TTC39CQ8N584 583 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 C1orf127Q8N9H9 656 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 RBM15BQ8NDT2 890 aaKnown RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 PHC3Q8NDX5 983 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 C1orf216Q8TAB5 229 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 PHOSPHO2Q8TCD6 241 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 TTC17Q96AE7 1141 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 BICD1Q96G01 975 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 FAM167AQ96KS9 214 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 ZNF778Q96MU6 729 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 OLFM3Q96PB7 478 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 FAM111AQ96PZ2 611 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 PANX3Q96QZ0 392 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 TWNKQ96RR1 684 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 HAPLN3Q96S86 360 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 ZNF184Q99676 751 aaPredicted RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 EBNA1BP2Q99848 306 aaKnown RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 ZNF670Q9BS34 389 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 MTMR12Q9C0I1 747 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 ELOVL4Q9GZR5 314 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 C2orf40Q9H1Z8 148 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 NKX2-4Q9H2Z4 354 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 C12orf65Q9H3J6 166 aaKnown RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 PRDM12Q9H4Q4 367 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 ASB7Q9H672 318 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 FBXO6Q9NRD1 293 aaPredicted RBP7.07□□□□□ -1.28
UBR4-212ENST00000475973 ASNSD1Q9NWL6 643 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 PDP2Q9P2J9 529 aa7.07□□□□□ -1.28
UBR4-212ENST00000475973 SAE1Q9UBE0 346 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms