RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 ADAM17P78536 824 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 XIAPP98170 497 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 ROR1Q01973 937 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 GRIN1Q05586 938 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 SLC34A1Q06495 639 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 COASYQ13057 564 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 KLF1Q13351 362 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 KARSQ15046 597 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 TAF12Q16514 161 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 KRT24Q2M2I5 525 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 SMU1Q2TAY7 513 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 LSM12Q3MHD2 195 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 SUPT20HL1Q3ZLR7 823 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 MINDY4Q4G0A6 757 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 ERMARDQ5T6L9 678 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 CFAP161Q6P656 301 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 KDELC1Q6UW63 502 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 MAEAQ7L5Y9 396 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 CDR2LQ86X02 465 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 UNC45BQ8IWX7 931 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 ADSSL1Q8N142 457 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 SLC35F6Q8N357 371 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 CPA6Q8N4T0 437 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 LHFPL5Q8TAF8 219 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 DDI1Q8WTU0 396 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 NMD3Q96D46 503 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 MCMBPQ9BTE3 642 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 CCDC106Q9BWC9 280 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 BTBD2Q9BX70 525 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 GON7Q9BXV9 100 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 EDEM3Q9BZQ6 932 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 CLPBQ9H078 707 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 LMAN2LQ9H0V9 348 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 WNT5BQ9H1J7 359 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 LRMDAQ9H2I8 198 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 DPEP3Q9H4B8 488 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 USP29Q9HBJ7 922 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 RXFP1Q9HBX9 757 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 CABP5Q9NP86 173 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 GPRC5CQ9NQ84 441 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 TRNAU1APQ9NX07 287 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 DTLQ9NZJ0 730 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 TBC1D14Q9P2M4 693 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 NKX1-2Q9UD57 310 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 VPS51Q9UID3 782 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 PCOLCE2Q9UKZ9 415 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 CLEC4AQ9UMR7 237 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 ARHGAP26Q9UNA1 814 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 SNX7Q9UNH6 387 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 MINPP1Q9UNW1 487 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 POLHQ9Y253 713 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 B3GNT3Q9Y2A9 372 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 ANKRD6Q9Y2G4 727 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 RRP7AQ9Y3A4 280 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 PCDHGA3Q9Y5H0 932 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 CAPN6Q9Y6Q1 641 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 C1orf167Q5SNV9 1468 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 PTPRUQ92729 1446 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 CPDO75976 1380 aa6.16□□□□□ -1.42
ECHDC1-215ENST00000475319 WDR17Q8IZU2 1322 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 PCDH11XQ9BZA7 1347 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 ILVBLA1L0T0 632 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 ARHGEF35A5YM69 484 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 ZNF233A6NK53 670 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 F8W031 263 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 K7ENM7 598 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 PSMD9O00233 223 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 ARNTLO00327 626 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 BTN3A1O00481 513 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 CLOCKO15516 846 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 ZBTB43O43298 467 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 GATCO43716 136 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 MSCO60682 206 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 DNAJB5O75953 348 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 SLITRK3O94933 977 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 BAG2O95816 211 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 GAS8O95995 478 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 GFAPP14136 432 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 PRKCAP17252 672 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 TYK2P29597 1187 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 PPP1R2P41236 205 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 MAGEA11P43364 429 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 PEX3P56589 373 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 RAB14P61106 215 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 PLIN5Q00G26 463 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 RHAGQ02094 409 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 TAP1Q03518 808 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 KRT17Q04695 432 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 STX3Q13277 289 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 DHX34Q14147 1143 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 EDRF1Q3B7T1 1238 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 C5orf22Q49AR2 442 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 TIGD2Q4W5G0 525 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 AADACL4Q5VUY2 407 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 PAPD7Q5XG87 772 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 SWSAP1Q6NVH7 229 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 PPP1R2P3Q6NXS1 205 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 PGM2L1Q6PCE3 622 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 LRRC74BQ6ZQY2 392 aa6.15□□□□□ -1.42
ECHDC1-215ENST00000475319 TMC3Q7Z5M5 1100 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms