RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 MSANTD2Q6P1R3 559 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 MFN1Q8IWA4 741 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 UBR7Q8N806 425 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 FIBINQ8TAL6 211 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 SLC35F5Q8WV83 523 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 SMARCE1Q969G3 411 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 AZIN2Q96A70 460 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 TTC17Q96AE7 1141 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 LRIG1Q96JA1 1093 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 LMLNQ96KR4 655 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 TSG101Q99816 390 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 IRX2Q9BZI1 471 aaPredicted RBP16.22■□□□□ 0.19
SRRT-209ENST00000474896 PABPC3Q9H361 631 aaKnown RBP16.22■□□□□ 0.19
SRRT-209ENST00000474896 NBEAQ8NFP9 2946 aa16.22■□□□□ 0.19
SRRT-209ENST00000474896 MUC22E2RYF6 1773 aaPredicted RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 RNF225M0QZC1 329 aaPredicted RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 SLC16A3O15427 465 aaKnown RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 DFNA5O60443 496 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 RNASEH1O60930 286 aaKnown RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 SIN3BO75182 1162 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 TBXAS1P24557 533 aaPredicted RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 GALCP54803 685 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 RACK1P63244 317 aaKnown RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 FKBP3Q00688 224 aaKnown RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 SMAD1Q15797 465 aaKnown RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 CNGA2Q16280 664 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 NADSYN1Q6IA69 706 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 TMEM270Q6UE05 265 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 DHRS13Q6UX07 377 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 USP30Q70CQ3 517 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 DHX40Q8IX18 779 aaKnown RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 PDCD7Q8N8D1 485 aaKnown RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 ZNF557Q8N988 423 aaPredicted RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 SPATA20Q8TB22 786 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 CLEC4CQ8WTT0 213 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 IRGQQ8WZA9 623 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 MYO19Q96H55 970 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 ACE2Q9BYF1 805 aaPredicted RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 NEUROG2Q9H2A3 272 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 SCUBE2Q9NQ36 999 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 INTS6Q9UL03 887 aaKnown RBP16.21■□□□□ 0.19
SRRT-209ENST00000474896 SCML1Q9UN30 329 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 PCDHB4Q9Y5E5 795 aa16.21■□□□□ 0.19
SRRT-209ENST00000474896 ASXL3Q9C0F0 2248 aa16.21■□□□□ 0.18
SRRT-209ENST00000474896 A0A1W2PP55 124 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 A0A1W2PPC4 97 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 VILLO15195 856 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 MID1O15344 667 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 LTFP02788 710 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 PAEPP09466 180 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 CSKP41240 450 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 PMS1P54277 932 aaKnown RBP16.2■□□□□ 0.18
SRRT-209ENST00000474896 RPS24P62847 133 aaKnown RBP16.2■□□□□ 0.18
SRRT-209ENST00000474896 SFSWAPQ12872 951 aaKnown RBP16.2■□□□□ 0.18
SRRT-209ENST00000474896 KLHL40Q2TBA0 621 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 HNRNPA1L2Q32P51 320 aaKnown RBP16.2■□□□□ 0.18
SRRT-209ENST00000474896 NCEH1Q6PIU2 408 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 GATAD2AQ86YP4 633 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 CARNMT1Q8N4J0 409 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 HJURPQ8NCD3 748 aaPredicted RBP16.2■□□□□ 0.18
SRRT-209ENST00000474896 SLC35C1Q96A29 364 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 MYEOVQ96EZ4 313 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 MRGPRX3Q96LB0 322 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 SLC6A18Q96N87 628 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 GSDMAQ96QA5 445 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 OMDQ99983 421 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 DDX50Q9BQ39 737 aaKnown RBP16.2■□□□□ 0.18
SRRT-209ENST00000474896 ZSWIM1Q9BR11 485 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 EBF2Q9HAK2 575 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 RMND1Q9NWS8 449 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 FTSJ1Q9UET6 329 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 SERGEFQ9UGK8 458 aa16.2■□□□□ 0.18
SRRT-209ENST00000474896 ARMCX3Q9UH62 379 aaPredicted RBP16.2■□□□□ 0.18
SRRT-209ENST00000474896 ITPR1Q14643 2758 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 A0A1B0GTQ1 180 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 PAPSS1O43252 624 aaPredicted RBP16.19■□□□□ 0.18
SRRT-209ENST00000474896 CALCAP01258 141 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 ASLP04424 464 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 CST6Q15828 149 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 INAVAQ3KP66 663 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 FSCBQ5H9T9 825 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 CCDC183Q5T5S1 534 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 C9orf64Q5T6V5 341 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 ZNF658Q5TYW1 1059 aaPredicted RBP16.19■□□□□ 0.18
SRRT-209ENST00000474896 MMS22LQ6ZRQ5 1243 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 MMAAQ8IVH4 418 aaKnown RBP16.19■□□□□ 0.18
SRRT-209ENST00000474896 CCDC117Q8IWD4 279 aaPredicted RBP16.19■□□□□ 0.18
SRRT-209ENST00000474896 CFAP52Q8N1V2 620 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 SKA1Q96BD8 255 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 FCRL2Q96LA5 508 aaPredicted RBP16.19■□□□□ 0.18
SRRT-209ENST00000474896 HSFY1Q96LI6 401 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 PRICKLE1Q96MT3 831 aaPredicted RBP16.19■□□□□ 0.18
SRRT-209ENST00000474896 MIS12Q9H081 205 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 TMEM63CQ9P1W3 806 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 KIAA1468Q9P260 1216 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 ERVW-1Q9UQF0 538 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 CELSR3Q9NYQ7 3312 aa16.19■□□□□ 0.18
SRRT-209ENST00000474896 TYW5A2RUC4 315 aaKnown RBP16.18■□□□□ 0.18
SRRT-209ENST00000474896 TRIM49BA6NDI0 452 aa16.18■□□□□ 0.18
SRRT-209ENST00000474896 LRRC72A6NJI9 287 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms