RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 DCP1BQ8IZD4 617 aaKnown RBP10.09□□□□□ -0.79
USP39-214ENST00000474572 ZSCAN18Q8TBC5 510 aaPredicted RBP10.09□□□□□ -0.79
USP39-214ENST00000474572 HASPINQ8TF76 798 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 EDEM1Q92611 657 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 TTC17Q96AE7 1141 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 MTBPQ96DY7 904 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 CFAP36Q96G28 342 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 OXNAD1Q96HP4 312 aaPredicted RBP10.09□□□□□ -0.79
USP39-214ENST00000474572 SERAC1Q96JX3 654 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 C8orf48Q96LL4 319 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 TSGA13Q96PP4 275 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 NAT9Q9BTE0 207 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 TKTL2Q9H0I9 626 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 VPS11Q9H270 941 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 RASSF4Q9H2L5 321 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 GPBP1L1Q9HC44 474 aaPredicted RBP10.09□□□□□ -0.79
USP39-214ENST00000474572 HMX1Q9NP08 348 aaPredicted RBP10.09□□□□□ -0.79
USP39-214ENST00000474572 STARD7Q9NQZ5 370 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 TBC1D13Q9NVG8 400 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 IL37Q9NZH6 218 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 TRHDEQ9UKU6 1024 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 SLC12A4Q9UP95 1085 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 ARL2BPQ9Y2Y0 163 aa10.09□□□□□ -0.79
USP39-214ENST00000474572 FAM92AA1XBS5 289 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 ERI2A8K979 691 aaKnown RBP10.08□□□□□ -0.8
USP39-214ENST00000474572 WASH4PA8MWX3 477 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 DNM1LO00429 736 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 RFPL1O75677 317 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 DNAJC8O75937 253 aaPredicted RBP10.08□□□□□ -0.8
USP39-214ENST00000474572 AP2A1O95782 977 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 MT-ND3P03897 115 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 MYCNP04198 464 aaPredicted RBP10.08□□□□□ -0.8
USP39-214ENST00000474572 YY1P25490 414 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 CNTFP26441 200 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 GBP2P32456 591 aaPredicted RBP10.08□□□□□ -0.8
USP39-214ENST00000474572 GARSP41250 739 aaKnown RBP10.08□□□□□ -0.8
USP39-214ENST00000474572 DNAJC3Q13217 504 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 NFE2Q16621 373 aaPredicted RBP10.08□□□□□ -0.8
USP39-214ENST00000474572 GALNTL6Q49A17 601 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 TRMT10BQ6PF06 316 aaKnown RBP10.08□□□□□ -0.8
USP39-214ENST00000474572 LRRC8DQ7L1W4 858 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 TRPM8Q7Z2W7 1104 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 ARHGAP12Q8IWW6 846 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 FAM126BQ8IXS8 530 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 CCDC33Q8N5R6 958 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 PDCD7Q8N8D1 485 aaKnown RBP10.08□□□□□ -0.8
USP39-214ENST00000474572 RAET1EQ8TD07 263 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 TCP10LQ8TDR4 215 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 MRRFQ96E11 262 aaKnown RBP10.08□□□□□ -0.8
USP39-214ENST00000474572 STAMBPL1Q96FJ0 436 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 GBA3Q9H227 469 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 CASS4Q9NQ75 786 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 HAUS2Q9NVX0 235 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 OR12D3Q9UGF7 316 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 SCML2Q9UQR0 700 aa10.08□□□□□ -0.8
USP39-214ENST00000474572 DOCK4Q8N1I0 1966 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 SHROOM3Q8TF72 1996 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 HMX2A2RU54 273 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 SDR42E2A6NKP2 422 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 TRIM49D1C9J1S8 452 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 FGF10O15520 208 aaPredicted RBP10.07□□□□□ -0.8
USP39-214ENST00000474572 PIAS1O75925 651 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 KRT37O76014 449 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 SELPP16109 830 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 PGAM1P18669 254 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 ADRA1DP25100 572 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 MGAT1P26572 445 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 CD68P34810 354 aaPredicted RBP10.07□□□□□ -0.8
USP39-214ENST00000474572 LIG3P49916 1009 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 MGAT5Q09328 741 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 CCDC15Q0P6D6 951 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 IFRD2Q12894 506 aaPredicted RBP10.07□□□□□ -0.8
USP39-214ENST00000474572 ZBTB17Q13105 803 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 ZKSCAN8Q15776 578 aaPredicted RBP10.07□□□□□ -0.8
USP39-214ENST00000474572 TEX44Q53QW1 395 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 PLEKHG4Q58EX7 1191 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 SPANXN3Q5MJ09 141 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 RNF187Q5TA31 235 aaPredicted RBP10.07□□□□□ -0.8
USP39-214ENST00000474572 LGSNQ5TDP6 509 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 HHATQ5VTY9 493 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 BTBD8Q5XKL5 378 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 AFMIDQ63HM1 303 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 PID1Q7Z2X4 250 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 CRIPAKQ8N1N5 446 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 LZTR1Q8N653 840 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 PPM1NQ8N819 430 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 CCNYQ8ND76 341 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 SCAMP5Q8TAC9 235 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 ZNF398Q8TD17 642 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 LRRC8CQ8TDW0 803 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 ZNF75CPQ92670 426 aaPredicted RBP10.07□□□□□ -0.8
USP39-214ENST00000474572 CASP10Q92851 521 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 SLC39A13Q96H72 371 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 TEKT5Q96M29 485 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 PITPNM3Q9BZ71 974 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.07□□□□□ -0.8
USP39-214ENST00000474572 NMUR1Q9HB89 426 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 ABCF3Q9NUQ8 709 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 MARCH5Q9NX47 278 aa10.07□□□□□ -0.8
USP39-214ENST00000474572 FNIP2Q9P278 1114 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms