RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 ERICH1Q86X53 443 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 CACUL1Q86Y37 369 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 DEFB119Q8N690 84 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 CPA5Q8WXQ8 436 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 PIGKQ92643 395 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 RNF34Q969K3 372 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 C18orf8Q96DM3 657 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 PCMTD1Q96MG8 357 aaPredicted RBP18.56■□□□□ 0.56
UPF3A-203ENST00000474056 SPAG5Q96R06 1193 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 TMEM245Q9H330 911 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 PRDM16Q9HAZ2 1276 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 SLC12A6Q9UHW9 1150 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 DAAM1Q9Y4D1 1078 aa18.56■□□□□ 0.56
UPF3A-203ENST00000474056 F5H5T6 163 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 M0QYT0 321 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 AP5Z1O43299 807 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 DLDP09622 509 aaKnown RBP18.55■□□□□ 0.56
UPF3A-203ENST00000474056 SLC2A3P11169 496 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 GGCXP38435 758 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 MATKP42679 507 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 CIR1Q86X95 450 aaPredicted RBP18.55■□□□□ 0.56
UPF3A-203ENST00000474056 ZNF677Q86XU0 584 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 TMPRSS6Q8IU80 811 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 NEK11Q8NG66 645 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 MYO19Q96H55 970 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 ERGIC2Q96RQ1 377 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 NPY6RQ99463 290 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 TMEM74BQ9NUR3 256 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.55■□□□□ 0.56
UPF3A-203ENST00000474056 PLA2G4CQ9UP65 541 aa18.55■□□□□ 0.56
UPF3A-203ENST00000474056 ASCC3Q8N3C0 2202 aaKnown RBP18.55■□□□□ 0.56
UPF3A-203ENST00000474056 LAMA1P25391 3075 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 CACNA1EQ15878 2313 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 DCDC2BA2VCK2 349 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 H0Y626 953 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 GOLGA8SH3BPF8 625 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 CYP1A1P04798 512 aaPredicted RBP18.54■□□□□ 0.56
UPF3A-203ENST00000474056 ATP5BP06576 529 aaKnown RBP18.54■□□□□ 0.56
UPF3A-203ENST00000474056 CHRNB2P17787 502 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 FLT3P36888 993 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 SCNN1AP37088 669 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 CSKP41240 450 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 STAT1P42224 750 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 SULT1E1P49888 294 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 CDR2Q01850 454 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 CAMK2GQ13555 558 aaPredicted RBP18.54■□□□□ 0.56
UPF3A-203ENST00000474056 SPDYCQ5MJ68 293 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 LYSMD4Q5XG99 296 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 METTL3Q86U44 580 aaKnown RBP18.54■□□□□ 0.56
UPF3A-203ENST00000474056 SLC41A1Q8IVJ1 513 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 CCDC117Q8IWD4 279 aaPredicted RBP18.54■□□□□ 0.56
UPF3A-203ENST00000474056 DHX40Q8IX18 779 aaKnown RBP18.54■□□□□ 0.56
UPF3A-203ENST00000474056 TTC17Q96AE7 1141 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 SIPA1Q96FS4 1042 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 PIGVQ9NUD9 493 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 RRN3Q9NYV6 651 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 USP36Q9P275 1121 aaKnown RBP18.54■□□□□ 0.56
UPF3A-203ENST00000474056 STAP1Q9ULZ2 295 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 HS3ST4Q9Y661 456 aa18.54■□□□□ 0.56
UPF3A-203ENST00000474056 ITPKAP23677 461 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 LIMK1P53667 647 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 CENPCQ03188 943 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 ZNF33AQ06730 810 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 PITRM1Q5JRX3 1037 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 TRNP1Q6NT89 227 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 FBXL22Q6P050 247 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 CCAR2Q8N163 923 aaKnown RBP18.53■□□□□ 0.56
UPF3A-203ENST00000474056 MSANTD4Q8NCY6 345 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 OR2T3Q8NH03 318 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 PRCCQ92733 491 aaPredicted RBP18.53■□□□□ 0.56
UPF3A-203ENST00000474056 IGSF8Q969P0 613 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 NT5C3BQ969T7 300 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 TBCBQ99426 244 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 BPIFA3Q9BQP9 254 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 EDEM2Q9BV94 578 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 NAT10Q9H0A0 1025 aaKnown RBP18.53■□□□□ 0.56
UPF3A-203ENST00000474056 MTG2Q9H4K7 406 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 ANLNQ9NQW6 1124 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 PCDH15Q96QU1 1955 aa18.53■□□□□ 0.56
UPF3A-203ENST00000474056 MED19A0JLT2 244 aaPredicted RBP18.52■□□□□ 0.56
UPF3A-203ENST00000474056 LNP1A1A4G5 178 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 I6L893 689 aaPredicted RBP18.52■□□□□ 0.56
UPF3A-203ENST00000474056 KHNYNO15037 678 aaKnown RBP18.52■□□□□ 0.56
UPF3A-203ENST00000474056 TEX33O43247 280 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 NDUFS2O75306 463 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 ADCY5O95622 1261 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 CD6P30203 668 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 CTSOP43234 321 aaPredicted RBP18.52■□□□□ 0.56
UPF3A-203ENST00000474056 NUMBP49757 651 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 IRAK1P51617 712 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 AUHQ13825 339 aaKnown RBP18.52■□□□□ 0.56
UPF3A-203ENST00000474056 PLEKHG6Q3KR16 790 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 RABGAP1LQ5R372 815 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 STPG1Q5TH74 334 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 PEAR1Q5VY43 1037 aaPredicted RBP18.52■□□□□ 0.56
UPF3A-203ENST00000474056 SYT12Q8IV01 421 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 APCDD1Q8J025 514 aa18.52■□□□□ 0.56
UPF3A-203ENST00000474056 PGAP3Q96FM1 320 aaPredicted RBP18.52■□□□□ 0.56
UPF3A-203ENST00000474056 TOE1Q96GM8 510 aaKnown RBP18.52■□□□□ 0.56
UPF3A-203ENST00000474056 MRGPRX3Q96LB0 322 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms