RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 UHMK1Q8TAS1 419 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ABHD4Q8TB40 342 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 TRAPPC12Q8WVT3 735 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ATXN2LQ8WWM7 1075 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 GRAMD1AQ96CP6 724 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 VWCEQ96DN2 955 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 SGSM3Q96HU1 749 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 SEC16BQ96JE7 1060 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 SMC6Q96SB8 1091 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 PPP1R16BQ96T49 567 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 FDXACB1Q9BRP7 624 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 SYT17Q9BSW7 474 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 CNPY3Q9BT09 278 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 KRTAP4-5Q9BYR2 181 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 TRIM7Q9C029 511 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 XYLT2Q9H1B5 865 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ADAMTS10Q9H324 1103 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ABHD16BQ9H3Z7 469 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 PDZD7Q9H5P4 517 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 CCDC134Q9H6E4 229 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 ZWILCHQ9H900 591 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 PRDM16Q9HAZ2 1276 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 TXNRD2Q9NNW7 524 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 METTL5Q9NRN9 209 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 KLHL11Q9NVR0 708 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 NINJ2Q9NZG7 142 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 LGALS13Q9UHV8 139 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 DICER1Q9UPY3 1922 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 NEU2Q9Y3R4 380 aa6.12□□□□□ -1.43
ATPAF1-204ENST00000474020 TMEM120BA0PK00 339 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 SLC15A5A6NIM6 579 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 F8VP50 259 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 PI4K2BG5E9Z4 385 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 APOC4-APOC2K7ER74 178 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 M0QZ92 97 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 ABLIM1O14639 778 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 CST8O60676 142 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 STK10O94804 968 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 CPP00450 1065 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 APOC2P02655 101 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 ZNF286BP0CG31 522 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 CYP2C8P10632 490 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 GHRP10912 638 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 GNAT1P11488 350 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 BRAFP15056 766 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 RAG1P15918 1043 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 ARF4P18085 180 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 KRT15P19012 456 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 KLRC2P26717 231 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 STIP1P31948 543 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 CDKN2BP42772 138 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 ACADSBP45954 432 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 GABRB2P47870 512 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 ZNF143P52747 638 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 RAD23BP54727 409 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 EIF3EP60228 445 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 ERVFC1P60507 584 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 RPL7AP62424 266 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 DYNLT1P63172 113 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 RNASELQ05823 741 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 SLC20A2Q08357 652 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 INCA1Q0VD86 236 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 TMED2Q15363 201 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 GPR162Q16538 588 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 KYNUQ16719 465 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 LONRF1Q17RB8 773 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 DUSP28Q4G0W2 176 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 BOLA3Q53S33 107 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 LGSNQ5TDP6 509 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 TMCO4Q5TGY1 634 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 CYP4F22Q6NT55 531 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 NOTUMQ6P988 496 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 SLC27A1Q6PCB7 646 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 DARS2Q6PI48 645 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 LCLAT1Q6UWP7 414 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 MAMDC4Q6UXC1 1216 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 MFSD7Q6UXD7 560 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 PRR23BQ6ZRT6 265 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 BZW1Q7L1Q6 419 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 UNC93AQ86WB7 457 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 VSIG1Q86XK7 387 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 XYLT1Q86Y38 959 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 TDRPQ86YL5 185 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 CPNE8Q86YQ8 564 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 CDKL3Q8IVW4 592 aaPredicted RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 PALM2Q8IXS6 379 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 LRRC52Q8N7C0 313 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 C2orf69Q8N8R5 385 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 ANKRD42Q8N9B4 389 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 PYROXD1Q8WU10 500 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 MYLIPQ8WY64 445 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 TFAP2BQ92481 460 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 COPS5Q92905 334 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 MCRS1Q96EZ8 462 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 FGD4Q96M96 766 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 TBCBQ99426 244 aa6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 PRMT1Q99873 361 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 DDX23Q9BUQ8 820 aaKnown RBP6.11□□□□□ -1.43
ATPAF1-204ENST00000474020 KATNAL1Q9BW62 490 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms