RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CSRP3P50461 194 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 VAMP7P51809 220 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 TKTL1P51854 596 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 BCAT1P54687 386 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 PCBP4P57723 403 aaKnown RBP9.72□□□□□ -0.85
VCL-204ENST00000472585 YWHAGP61981 247 aaKnown RBP eCLIP9.72□□□□□ -0.85
VCL-204ENST00000472585 PKDCCQ504Y2 493 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 MBLAC2Q68D91 279 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 PRICKLE2Q7Z3G6 844 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.72□□□□□ -0.85
VCL-204ENST00000472585 SAP25Q8TEE9 199 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 TATDN2Q93075 761 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 INTS4Q96HW7 963 aaKnown RBP9.72□□□□□ -0.85
VCL-204ENST00000472585 SLC6A18Q96N87 628 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 ULBP1Q9BZM6 244 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 UBXN6Q9BZV1 441 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 SEMA4CQ9C0C4 833 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 BTBD1Q9H0C5 482 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 CAAP1Q9H8G2 361 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 CPNE5Q9HCH3 593 aa9.72□□□□□ -0.85
VCL-204ENST00000472585 INTS6Q9UL03 887 aaKnown RBP9.72□□□□□ -0.85
VCL-204ENST00000472585 HEMK1Q9Y5R4 338 aaPredicted RBP9.72□□□□□ -0.85
VCL-204ENST00000472585 TEX15Q9BXT5 2789 aa9.71□□□□□ -0.85
VCL-204ENST00000472585 DOPEY2Q9Y3R5 2298 aa9.71□□□□□ -0.85
VCL-204ENST00000472585 A0A1W2PR77 199 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 YJEFN3A6XGL0 299 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 E7ENQ6 273 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 MSI1O43347 362 aaKnown RBP9.71□□□□□ -0.86
VCL-204ENST00000472585 YEATS4O95619 227 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 ZBED1O96006 694 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 ACADVLP49748 655 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 GALCP54803 685 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 SRSF1Q07955 248 aaKnown RBP eCLIP9.71□□□□□ -0.86
VCL-204ENST00000472585 BNIP3Q12983 259 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 FNDC3BQ53EP0 1204 aaKnown RBP9.71□□□□□ -0.86
VCL-204ENST00000472585 MPPE1Q53F39 396 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 CEP135Q66GS9 1140 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 ARHGAP17Q68EM7 881 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 SMYD5Q6GMV2 418 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 RFWD3Q6PCD5 774 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 FBXL19Q6PCT2 694 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 TADA2BQ86TJ2 420 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 ERICH1Q86X53 443 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 EID2Q8N6I1 236 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 GOLGA5Q8TBA6 731 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 TSC1Q92574 1164 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 EDEM1Q92611 657 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 TMA16Q96EY4 203 aaKnown RBP9.71□□□□□ -0.86
VCL-204ENST00000472585 MED8Q96G25 268 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 MRGPRX3Q96LB0 322 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 ELF4Q99607 663 aaPredicted RBP9.71□□□□□ -0.86
VCL-204ENST00000472585 NIF3L1Q9GZT8 377 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 RSPH9Q9H1X1 276 aaPredicted RBP9.71□□□□□ -0.86
VCL-204ENST00000472585 NEUROG2Q9H2A3 272 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 MAGEF1Q9HAY2 307 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 CISHQ9NSE2 258 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 GGA2Q9UJY4 613 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 CLCA2Q9UQC9 943 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 TRAF3IP3Q9Y228 551 aa9.71□□□□□ -0.86
VCL-204ENST00000472585 PLXNA2O75051 1894 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 A0A1W2PPC4 97 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 VILLO15195 856 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 MAPK13O15264 365 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 YKT6O15498 198 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 SIN3BO75182 1162 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 DNTTP04053 509 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 CYBBP04839 570 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 DLDP09622 509 aaKnown RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 SLFN14P0C7P3 912 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 PABPC1P11940 636 aaKnown RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 CTSOP43234 321 aaPredicted RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 RACK1P63244 317 aaKnown RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 PDE4CQ08493 712 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 ILKQ13418 452 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 FAM133BQ5BKY9 247 aaKnown RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 FSCBQ5H9T9 825 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 ADGRF1Q5T601 910 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 PIK3R6Q5UE93 754 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 BSPRYQ5W0U4 402 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 KIAA0895LQ68EN5 471 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 NADSYN1Q6IA69 706 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 NCEH1Q6PIU2 408 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 MMS22LQ6ZRQ5 1243 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 KANSL1Q7Z3B3 1105 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 DHX40Q8IX18 779 aaKnown RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 ANKRD52Q8NB46 1076 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 RNF166Q96A37 237 aaPredicted RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 TTC17Q96AE7 1141 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 PLD4Q96BZ4 506 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 EEF2KMTQ96G04 330 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 ZNF578Q96N58 590 aaPredicted RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 ZNF396Q96N95 335 aaPredicted RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 CDK5RAP1Q96SZ6 601 aaKnown RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 FAM129BQ96TA1 746 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 ZSWIM1Q9BR11 485 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 FAM117AQ9C073 453 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 PABPC3Q9H361 631 aaKnown RBP9.7□□□□□ -0.86
VCL-204ENST00000472585 MMRN2Q9H8L6 949 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 SGK2Q9HBY8 427 aa9.7□□□□□ -0.86
VCL-204ENST00000472585 IL17BQ9UHF5 180 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms