RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 EFCAB12Q6NXP0 572 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 Q6ZSN1 163 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 OVCH2Q7RTZ1 564 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 XYLT1Q86Y38 959 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 PLXDC1Q8IUK5 500 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 DENND1CQ8IV53 801 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 C4orf19Q8IY42 314 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 HACE1Q8IYU2 909 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 ZBTB34Q8NCN2 500 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 MCPH1Q8NEM0 835 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 Q8TCH9 128 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 DNAJB3Q8WWF6 145 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 IFT74Q96LB3 600 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 MBOAT7Q96N66 472 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 WWC2-AS2Q96NR7 200 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 FAM193BQ96PV7 902 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-208ENST00000469585 CGRRF1Q99675 332 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 VRK1Q99986 396 aaPredicted RBP6.82□□□□□ -1.32
PTCD3-208ENST00000469585 GDF15Q99988 308 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 EIF2AK1Q9BQI3 630 aaKnown RBP6.82□□□□□ -1.32
PTCD3-208ENST00000469585 PYM1Q9BRP8 204 aaKnown RBP6.82□□□□□ -1.32
PTCD3-208ENST00000469585 LRFN3Q9BTN0 628 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 EPC1Q9H2F5 836 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 ATP6V0A4Q9HBG4 840 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 KMT5AQ9NQR1 393 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 DACT1Q9NYF0 836 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 SLC23A1Q9UHI7 598 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 TRPV2Q9Y5S1 764 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 SQORQ9Y6N5 450 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 HTTP42858 3142 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 MYH9P35579 1960 aaKnown RBP6.82□□□□□ -1.32
PTCD3-208ENST00000469585 SCN10AQ9Y5Y9 1956 aa6.82□□□□□ -1.32
PTCD3-208ENST00000469585 MBLAC1A4D2B0 266 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-208ENST00000469585 VWA3AA6NCI4 1184 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 TBKBP1A7MCY6 615 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 B5MCH6 92 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 H0YCG3 227 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 B3GALT2O43825 422 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 RPS6KA5O75582 802 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 TUSC2O75896 110 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 UBXN7O94888 489 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 KRT18P05783 430 aaKnown RBP6.81□□□□□ -1.32
PTCD3-208ENST00000469585 MYBP10242 640 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 XRCC6P12956 609 aaKnown RBP eCLIP6.81□□□□□ -1.32
PTCD3-208ENST00000469585 SYT1P21579 422 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 ABCD1P33897 745 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 LONP1P36776 959 aaKnown RBP6.81□□□□□ -1.32
PTCD3-208ENST00000469585 CTTNQ14247 550 aaKnown RBP6.81□□□□□ -1.32
PTCD3-208ENST00000469585 GRM3Q14832 879 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 ELAVL1Q15717 326 aaKnown RBP6.81□□□□□ -1.32
PTCD3-208ENST00000469585 NPY5RQ15761 445 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 BMT2Q1RMZ1 405 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 LRIT3Q3SXY7 679 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 TSHZ1Q6ZSZ6 1077 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 SEM1Q6ZVN7 128 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 ZNF365Q70YC5 407 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 RPAINQ86UA6 219 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 ZNF410Q86VK4 478 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 RHPN2Q8IUC4 686 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 ZBTB8OSQ8IWT0 167 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 ELOA2Q8IYF1 753 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-208ENST00000469585 D2HGDHQ8N465 521 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 CAMKK1Q8N5S9 505 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 C3orf20Q8ND61 904 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 PHOSPHO2Q8TCD6 241 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 HERVK_113Q902F9 699 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 LENG9Q96B70 501 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 POLR3CQ9BUI4 534 aaPredicted RBP6.81□□□□□ -1.32
PTCD3-208ENST00000469585 BDH2Q9BUT1 245 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 LRRC27Q9C0I9 530 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 SLC28A3Q9HAS3 691 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 CD248Q9HCU0 757 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 ANKEF1Q9NU02 776 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 POLHQ9Y253 713 aa6.81□□□□□ -1.32
PTCD3-208ENST00000469585 GRIN2DO15399 1336 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 A6NNZ2 444 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 ZNF623O75123 536 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 RAP2AP10114 183 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 GHRP10912 638 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 MALP21145 153 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 COMTP21964 271 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 RPA1P27694 616 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 GNALP38405 381 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 IL12RB1P42701 662 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 CENPFP49454 3210 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 CRYBB1P53674 252 aaPredicted RBP6.8□□□□□ -1.32
PTCD3-208ENST00000469585 NUCB2P80303 420 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 EMC2Q15006 297 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 SHHQ15465 462 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 SPOUT1Q5T280 376 aaKnown RBP6.8□□□□□ -1.32
PTCD3-208ENST00000469585 MYOCDQ8IZQ8 938 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 MDGA1Q8NFP4 955 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 CXorf38Q8TB03 319 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 KCNG4Q8TDN1 519 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 RSPH1Q8WYR4 309 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 ST8SIA2Q92186 375 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 KIFAP3Q92845 792 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 NLRP4Q96MN2 994 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 YME1L1Q96TA2 773 aa6.8□□□□□ -1.32
PTCD3-208ENST00000469585 MYOCQ99972 504 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms