RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 ARHGEF18Q6ZSZ5 1173 aa19.52■□□□□ 0.71
SMC4-209ENST00000468653 OR2W6PQ8NHA6 318 aa19.52■□□□□ 0.71
SMC4-209ENST00000468653 EPB41L4BQ9H329 900 aa19.52■□□□□ 0.71
SMC4-209ENST00000468653 VANGL2Q9ULK5 521 aa19.52■□□□□ 0.71
SMC4-209ENST00000468653 NR2E3Q9Y5X4 410 aa19.52■□□□□ 0.71
SMC4-209ENST00000468653 A0A0A0MRY4 1105 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 LINC01553A4QN01 128 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 H0YGN5 161 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 RNF103O00237 685 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 RIPK2O43353 540 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 COCHO43405 550 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 CBX1P83916 185 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 GALNT2Q10471 571 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 AUHQ13825 339 aaKnown RBP19.51■□□□□ 0.71
SMC4-209ENST00000468653 SLC29A2Q14542 456 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 CEP85LQ5SZL2 805 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 ACBD5Q5T8D3 534 aaPredicted RBP19.51■□□□□ 0.71
SMC4-209ENST00000468653 KLHDC10Q6PID8 442 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 CCDC149Q6ZUS6 474 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 CENPUQ71F23 418 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 LZTR1Q8N653 840 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 CELF6Q96J87 481 aaKnown RBP19.51■□□□□ 0.71
SMC4-209ENST00000468653 SPATA13Q96N96 652 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 SH3GL2Q99962 352 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 SAYSD1Q9NPB0 183 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 NFS1Q9Y697 457 aa19.51■□□□□ 0.71
SMC4-209ENST00000468653 GOLGA6L10A6NI86 522 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 CHADO15335 359 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 GARSP41250 739 aaKnown RBP19.5■□□□□ 0.71
SMC4-209ENST00000468653 EIF3BP55884 814 aaKnown RBP19.5■□□□□ 0.71
SMC4-209ENST00000468653 ARL4CP56559 192 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 COG7P83436 770 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 HIF1AQ16665 826 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 ANKRD20A2Q5SQ80 823 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 ANKRD20A1Q5TYW2 823 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 ANKRD20A3Q5VUR7 823 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 PLPP4Q5VZY2 271 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 POF1BQ8WVV4 589 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 HDAC11Q96DB2 347 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 C17orf80Q9BSJ5 609 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 ETNK1Q9HBU6 452 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 MPP6Q9NZW5 540 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 ASB3Q9Y575 518 aa19.5■□□□□ 0.71
SMC4-209ENST00000468653 TCRBV7S3A2A0A539 114 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 TTC4O95801 387 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 LRG1P02750 347 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 NUDT17P0C025 328 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 MAGEA4P43358 317 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 KCNQ1P51787 676 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 PPIDQ08752 370 aaKnown RBP19.49■□□□□ 0.71
SMC4-209ENST00000468653 KCNJ11Q14654 390 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 FAXCQ5TGI0 409 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 RAP1GAP2Q684P5 730 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 LILRA6Q6PI73 481 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 RELL1Q8IUW5 271 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 RTL3Q8N8U3 475 aaKnown RBP19.49■□□□□ 0.71
SMC4-209ENST00000468653 SPPL3Q8TCT6 385 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 MICAL1Q8TDZ2 1067 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 TLR9Q9NR96 1032 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 IRAK3Q9Y616 596 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 PLXNA4Q9HCM2 1894 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 C2orf71A6NGG8 1288 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 DFFAO00273 331 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 POLR3GO15318 223 aaPredicted RBP19.49■□□□□ 0.71
SMC4-209ENST00000468653 MTSS1O43312 755 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 LPXNO60711 386 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 OPHN1O60890 802 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 TMEM63AO94886 807 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 ACSL3O95573 720 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 HARS2P49590 506 aaKnown RBP19.49■□□□□ 0.71
SMC4-209ENST00000468653 ZNF844Q08AG5 666 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 KYNUQ16719 465 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 PABPC1LQ4VXU2 614 aaKnown RBP19.49■□□□□ 0.71
SMC4-209ENST00000468653 SYCP2LQ5T4T6 812 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 ARTNQ5T4W7 220 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 PPP1R21Q6ZMI0 780 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 CHSY1Q86X52 802 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 MRPL43Q8N983 215 aaKnown RBP19.49■□□□□ 0.71
SMC4-209ENST00000468653 KREMEN2Q8NCW0 462 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 UHMK1Q8TAS1 419 aaKnown RBP19.49■□□□□ 0.71
SMC4-209ENST00000468653 ZYG11BQ9C0D3 744 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 NINJ2Q9NZG7 142 aa19.49■□□□□ 0.71
SMC4-209ENST00000468653 PPARGC1AQ9UBK2 798 aaKnown RBP19.49■□□□□ 0.71
SMC4-209ENST00000468653 GOLGA8KD6RF30 607 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 E7EVH7 732 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 KCNK1O00180 336 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 RNF40O75150 1001 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 METTL18O95568 372 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 GLUD1P00367 558 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 C8AP07357 584 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 APRTP07741 180 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 MYOGP15173 224 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 DNAJB1P25685 340 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 UBE3AQ05086 875 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 GAD2Q05329 585 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 PDIA2Q13087 525 aaKnown RBP19.48■□□□□ 0.71
SMC4-209ENST00000468653 UBAP2Q5T6F2 1119 aaKnown RBP19.48■□□□□ 0.71
SMC4-209ENST00000468653 FBXL22Q6P050 247 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 ZNF683Q8IZ20 524 aa19.48■□□□□ 0.71
SMC4-209ENST00000468653 DEPDC1BQ8WUY9 529 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms