RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 FAM183BPQ6ZVS7 135 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 SLC26A9Q7LBE3 791 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 CHSY1Q86X52 802 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 LGI2Q8N0V4 545 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 KDM1BQ8NB78 822 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 RNF34Q969K3 372 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 NAA15Q9BXJ9 866 aaKnown RBP19.75■□□□□ 0.75
COL7A1-207ENST00000467985 CD93Q9NPY3 652 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 PLCB1Q9NQ66 1216 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 TMEM51Q9NW97 253 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 RRN3Q9NYV6 651 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 FHOD1Q9Y613 1164 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 EPG5Q9HCE0 2579 aa19.75■□□□□ 0.75
COL7A1-207ENST00000467985 TPRP12270 2363 aaKnown RBP19.75■□□□□ 0.75
COL7A1-207ENST00000467985 F5H5T6 163 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 H0Y626 953 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 KCNK5O95279 499 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 ERBB2P04626 1255 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 PNMA6AP0CW24 399 aaPredicted RBP19.74■□□□□ 0.75
COL7A1-207ENST00000467985 CYP11B1P15538 503 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 ATXN3P54252 364 aaPredicted RBP19.74■□□□□ 0.75
COL7A1-207ENST00000467985 RABGAP1LQ5R372 815 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 CDKAL1Q5VV42 579 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 RAP1GAP2Q684P5 730 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 RGL4Q8IZJ4 473 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 CFAP52Q8N1V2 620 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 ZNF397Q8NF99 534 aaPredicted RBP19.74■□□□□ 0.75
COL7A1-207ENST00000467985 STK33Q9BYT3 514 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 PCED1AQ9H1Q7 454 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 CAPN10Q9HC96 672 aa19.74■□□□□ 0.75
COL7A1-207ENST00000467985 KIAA1522Q9P206 1035 aaPredicted RBP19.74■□□□□ 0.75
COL7A1-207ENST00000467985 XPO7Q9UIA9 1087 aaKnown RBP19.74■□□□□ 0.75
COL7A1-207ENST00000467985 MEI4A8MW99 385 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 DAB1O75553 588 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 GRAP2O75791 330 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 LSM8O95777 96 aaKnown RBP19.73■□□□□ 0.75
COL7A1-207ENST00000467985 SYPP08247 313 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 CDH5P33151 784 aaPredicted RBP19.73■□□□□ 0.75
COL7A1-207ENST00000467985 NOS2P35228 1153 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 CSKP41240 450 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 PITX1P78337 314 aaPredicted RBP19.73■□□□□ 0.75
COL7A1-207ENST00000467985 SLC12A1Q13621 1099 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 ARID5BQ14865 1188 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 KLHL40Q2TBA0 621 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 PTPN20Q4JDL3 420 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 SASS6Q6UVJ0 657 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 MSANTD4Q8NCY6 345 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 MYEOVQ96EZ4 313 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 PRMT1Q99873 361 aaKnown RBP19.73■□□□□ 0.75
COL7A1-207ENST00000467985 GPR174Q9BXC1 333 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 PRSS16Q9NQE7 514 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 TAB2Q9NYJ8 693 aa19.73■□□□□ 0.75
COL7A1-207ENST00000467985 SRPRAP08240 638 aaKnown RBP19.72■□□□□ 0.75
COL7A1-207ENST00000467985 CSRP1P21291 193 aaKnown RBP19.72■□□□□ 0.75
COL7A1-207ENST00000467985 SCNN1AP37088 669 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 MATKP42679 507 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 MAPK8P45983 427 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 OXCT1P55809 520 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 CACNA1EQ15878 2313 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 TTC31Q49AM3 519 aaPredicted RBP19.72■□□□□ 0.75
COL7A1-207ENST00000467985 PITRM1Q5JRX3 1037 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 FKBP15Q5T1M5 1219 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 CCDC183Q5T5S1 534 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 CAVIN1Q6NZI2 390 aaKnown RBP19.72■□□□□ 0.75
COL7A1-207ENST00000467985 ANKRD20A12PQ8NF67 263 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 DNASE2BQ8WZ79 361 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 C18orf8Q96DM3 657 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 PPP1R9BQ96SB3 815 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 ANO10Q9NW15 660 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 INTS6Q9UL03 887 aaKnown RBP19.72■□□□□ 0.75
COL7A1-207ENST00000467985 DAAM1Q9Y4D1 1078 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 PAXBP1Q9Y5B6 917 aa19.72■□□□□ 0.75
COL7A1-207ENST00000467985 SYNJ2BP-COX16A0A087WUM0 186 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 A0A1B0GVM2 712 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 TCAF2A6NFQ2 919 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 F8VZ95 297 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 ARHGAP33O14559 1287 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 RNASEH1O60930 286 aaKnown RBP19.71■□□□□ 0.75
COL7A1-207ENST00000467985 DNTTP04053 509 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 GABRB2P47870 512 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 NOVA1P51513 510 aaKnown RBP19.71■□□□□ 0.75
COL7A1-207ENST00000467985 ECT2LQ008S8 904 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 SFSWAPQ12872 951 aaKnown RBP19.71■□□□□ 0.75
COL7A1-207ENST00000467985 NME3Q13232 169 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 KRT31Q15323 416 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 HNRNPA1L2Q32P51 320 aaKnown RBP19.71■□□□□ 0.75
COL7A1-207ENST00000467985 UAP1L1Q3KQV9 507 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 FSCBQ5H9T9 825 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 RNF219Q5W0B1 726 aaPredicted RBP19.71■□□□□ 0.75
COL7A1-207ENST00000467985 ZNF776Q68DI1 518 aaPredicted RBP19.71■□□□□ 0.75
COL7A1-207ENST00000467985 PSAPL1Q6NUJ1 521 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 CACUL1Q86Y37 369 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 ZNF366Q8N895 744 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 VPS16Q9H269 839 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 COX16Q9P0S2 106 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 STAP1Q9ULZ2 295 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 SCML1Q9UN30 329 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 ERVW-1Q9UQF0 538 aa19.71■□□□□ 0.75
COL7A1-207ENST00000467985 METTL12A8MUP2 240 aa19.7■□□□□ 0.74
COL7A1-207ENST00000467985 M0QYT0 321 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms