RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 TBC1D3CQ6IPX1 549 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 RBM44Q6ZP01 1051 aaKnown RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 CBWD2Q8IUF1 395 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 ZC3H3Q8IXZ2 948 aaKnown RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 TBC1D3Q8IZP1 549 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 WDR36Q8NI36 951 aaKnown RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 ZNF564Q8TBZ8 553 aaPredicted RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 AK8Q96MA6 479 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 CDK5RAP1Q96SZ6 601 aaKnown RBP10.68□□□□□ -0.7
HDAC3-203ENST00000467533 FAM49BQ9NUQ9 324 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 SEL1LQ9UBV2 794 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 PCDHB13Q9Y5F0 798 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 PCDHA5Q9Y5H7 936 aa10.68□□□□□ -0.7
HDAC3-203ENST00000467533 BSNQ9UPA5 3926 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 KIF26BQ2KJY2 2108 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 SLC12A8A0AV02 714 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 KIAA0391O15091 583 aaKnown RBP10.67□□□□□ -0.7
HDAC3-203ENST00000467533 LATO43561 262 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 ITGA2BP08514 1039 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 CASP5P51878 434 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 MYL6P60660 151 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 POM121L1PQ3SYA9 428 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 ARL6IP4Q66PJ3 421 aaKnown RBP10.67□□□□□ -0.7
HDAC3-203ENST00000467533 CRTC1Q6UUV9 634 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 JAMLQ86YT9 394 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 AADATQ8N5Z0 425 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.67□□□□□ -0.7
HDAC3-203ENST00000467533 ZSCAN1Q8NBB4 408 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 SYAP1Q96A49 352 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-203ENST00000467533 CGRRF1Q99675 332 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 USP29Q9HBJ7 922 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 GEMIN8Q9NWZ8 242 aaKnown RBP10.67□□□□□ -0.7
HDAC3-203ENST00000467533 NLGN3Q9NZ94 848 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 PLEKHB1Q9UF11 243 aaPredicted RBP10.67□□□□□ -0.7
HDAC3-203ENST00000467533 STRIP2Q9ULQ0 834 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 DMTF1Q9Y222 760 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 PCDHGA4Q9Y5G9 962 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 DOPEY1Q5JWR5 2465 aa10.67□□□□□ -0.7
HDAC3-203ENST00000467533 ZFC3H1O60293 1989 aaKnown RBP10.66□□□□□ -0.7
HDAC3-203ENST00000467533 CCDC187A0A096LP49 1063 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 LY6G6EA0A0G2JKS1 128 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 CPED1A4D0V7 1026 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 C10orf142B7Z368 130 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 PIAS2O75928 621 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 STAU1O95793 577 aaKnown RBP10.66□□□□□ -0.7
HDAC3-203ENST00000467533 ADH1BP00325 375 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 GIMD1P0DJR0 217 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 GOT1P17174 413 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 GAP43P17677 238 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 ATICP31939 592 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 HMGN5P82970 282 aaKnown RBP10.66□□□□□ -0.7
HDAC3-203ENST00000467533 ALCAMQ13740 583 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 CLCA4Q14CN2 919 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 NCAPHQ15003 741 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 TGIF1Q15583 401 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 CDKN3Q16667 212 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 HNRNPA1L2Q32P51 320 aaKnown RBP10.66□□□□□ -0.7
HDAC3-203ENST00000467533 RILPL1Q5EBL4 403 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 RSRC2Q7L4I2 434 aaKnown RBP10.66□□□□□ -0.7
HDAC3-203ENST00000467533 EFL1Q7Z2Z2 1120 aaKnown RBP10.66□□□□□ -0.7
HDAC3-203ENST00000467533 SCD5Q86SK9 330 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 FAM217AQ8IXS0 508 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 PLD4Q96BZ4 506 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 KLHDC7BQ96G42 594 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 MYOCQ99972 504 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 SYNDIG1Q9H7V2 258 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 MARCH2Q9P0N8 246 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 CYTH4Q9UIA0 394 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 CA5BQ9Y2D0 317 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 U3KQA8 63 aa10.66□□□□□ -0.7
HDAC3-203ENST00000467533 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-203ENST00000467533 HHLA1C9JL84 531 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 PHACTR2O75167 634 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 RTN2O75298 545 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 KIF20AO95235 890 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 C5AR1P21730 350 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 SLC5A2P31639 672 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 CD70P32970 193 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 NUDT1P36639 197 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 CASRP41180 1078 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 HARS2P49590 506 aaKnown RBP10.65□□□□□ -0.7
HDAC3-203ENST00000467533 ANAPC15P60006 121 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 CYP4F2P78329 520 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 KCNMA1Q12791 1236 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 ZNF177Q13360 481 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-203ENST00000467533 ZNF699Q32M78 642 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 SETMARQ53H47 684 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-203ENST00000467533 ZNF667Q5HYK9 610 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 MANEAQ5SRI9 462 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 MCTP1Q6DN14 999 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 GUSBP11Q6P575 273 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 CLEC20AQ6ZU45 233 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 CCDC186Q7Z3E2 898 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 KIAA0907Q7Z7F0 614 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-203ENST00000467533 C14orf80Q86SX3 495 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 VASH2Q86V25 355 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 WFDC5Q8TCV5 224 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 CCDC127Q96BQ5 260 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 MYO19Q96H55 970 aa10.65□□□□□ -0.7
HDAC3-203ENST00000467533 LLPHQ9BRT6 129 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms