RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ZNF143P52747 638 aaPredicted RBP18.09■□□□□ 0.49
CPSF4-209ENST00000465132 RING1Q06587 406 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 PIGHQ14442 188 aaPredicted RBP18.09■□□□□ 0.49
CPSF4-209ENST00000465132 C2CD6Q53TS8 623 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 NUGGCQ68CJ6 796 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 TMEM92Q6UXU6 159 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 RAD9BQ6WBX8 426 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 SFTPA1Q8IWL2 248 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 RFFLQ8WZ73 363 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 NDRG1Q92597 394 aaKnown RBP18.09■□□□□ 0.49
CPSF4-209ENST00000465132 RNF34Q969K3 372 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 PGAP3Q96FM1 320 aaPredicted RBP18.09■□□□□ 0.49
CPSF4-209ENST00000465132 MCEEQ96PE7 176 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 PNKPQ96T60 521 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 CNPY3Q9BT09 278 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 NUP85Q9BW27 656 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 TBC1D14Q9P2M4 693 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 IP6K2Q9UHH9 426 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 NAALADL1Q9UQQ1 740 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 TLR6Q9Y2C9 796 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 SH3BP1Q9Y3L3 701 aa18.09■□□□□ 0.49
CPSF4-209ENST00000465132 MAP1BP46821 2468 aaKnown RBP18.09■□□□□ 0.49
CPSF4-209ENST00000465132 A0A0A0MRY4 1105 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 LNP1A1A4G5 178 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 C4orf47A7E2U8 309 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 ZSCAN12O43309 604 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 KRT86O43790 486 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 GRAP2O75791 330 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 KAT7O95251 611 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 TRUB2O95900 331 aaKnown RBP18.08■□□□□ 0.48
CPSF4-209ENST00000465132 ADH1CP00326 375 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 APOEP02649 317 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 RFC1P35251 1148 aaPredicted RBP18.08■□□□□ 0.48
CPSF4-209ENST00000465132 TCEAL1Q15170 157 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 TRIP4Q15650 581 aaPredicted RBP18.08■□□□□ 0.48
CPSF4-209ENST00000465132 HSF5Q4G112 596 aaPredicted RBP18.08■□□□□ 0.48
CPSF4-209ENST00000465132 PPP1R15BQ5SWA1 713 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 PSAPL1Q6NUJ1 521 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 STRADAQ7RTN6 431 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 C12orf40Q86WS4 652 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 MIB1Q86YT6 1006 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 ALLCQ8N6M5 410 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 IL17RCQ8NAC3 791 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 TXNDC5Q8NBS9 432 aaKnown RBP18.08■□□□□ 0.48
CPSF4-209ENST00000465132 DQX1Q8TE96 717 aaKnown RBP18.08■□□□□ 0.48
CPSF4-209ENST00000465132 UBE2Q2Q8WVN8 375 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 RXFP2Q8WXD0 754 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 OTUB2Q96DC9 234 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 DDX50Q9BQ39 737 aaKnown RBP18.08■□□□□ 0.48
CPSF4-209ENST00000465132 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.08■□□□□ 0.48
CPSF4-209ENST00000465132 OSER1Q9NX31 292 aa18.08■□□□□ 0.48
CPSF4-209ENST00000465132 TCRBV5S1A1TA0A578 114 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 SLC12A8A0AV02 714 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 E2F8A0AVK6 867 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 TMEM191CA6NGB0 347 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 C2CD4BA6NLJ0 364 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 BTNL10A8MVZ5 291 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 M0QYT0 321 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 SGK1O00141 431 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 KHNYNO15037 678 aaKnown RBP18.07■□□□□ 0.48
CPSF4-209ENST00000465132 ALDH1A2O94788 518 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 KLF8O95600 359 aaPredicted RBP18.07■□□□□ 0.48
CPSF4-209ENST00000465132 LATS1O95835 1130 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 APODP05090 189 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 ADH5P11766 374 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 CCR1P32246 355 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 KIR2DL1P43626 348 aaPredicted RBP18.07■□□□□ 0.48
CPSF4-209ENST00000465132 SULT1E1P49888 294 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 TBX4P57082 545 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 DEUP1Q05D60 604 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 TAF5Q15542 800 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 ARL13BQ3SXY8 428 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 BRMS1LQ5PSV4 323 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 CYP2U1Q7Z449 544 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 ZNF564Q8TBZ8 553 aaPredicted RBP18.07■□□□□ 0.48
CPSF4-209ENST00000465132 NT5C3BQ969T7 300 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 ZFRQ96KR1 1074 aaKnown RBP18.07■□□□□ 0.48
CPSF4-209ENST00000465132 NPY6RQ99463 290 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 ARHGEF4Q9NR80 690 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 DDIT4Q9NX09 232 aa18.07■□□□□ 0.48
CPSF4-209ENST00000465132 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.06■□□□□ 0.48
CPSF4-209ENST00000465132 FYNP06241 537 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 PSMA2P25787 234 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 RDXP35241 583 aaKnown RBP18.06■□□□□ 0.48
CPSF4-209ENST00000465132 TIE1P35590 1138 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 FLT3P36888 993 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 GRIA2P42262 883 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 TNFRSF4P43489 277 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 NOP2P46087 812 aaKnown RBP18.06■□□□□ 0.48
CPSF4-209ENST00000465132 SLC11A2P49281 568 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 NOVA1P51513 510 aaKnown RBP18.06■□□□□ 0.48
CPSF4-209ENST00000465132 AIF1P55008 147 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 CCZ1BP86790 482 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 CCZ1P86791 482 aaPredicted RBP18.06■□□□□ 0.48
CPSF4-209ENST00000465132 KDSRQ06136 332 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 LY6G5CQ5SRR4 150 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 EMC10Q5UCC4 262 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 DAB2IPQ5VWQ8 1189 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 SYPL2Q5VXT5 272 aa18.06■□□□□ 0.48
CPSF4-209ENST00000465132 PHLDB2Q86SQ0 1253 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms