RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 SHKBP1Q8TBC3 707 aa15.9■□□□□ 0.14
GYPC-205ENST00000464053 ADAMTS19Q8TE59 1207 aa15.9■□□□□ 0.14
GYPC-205ENST00000464053 AENQ8WTP8 325 aaKnown RBP15.9■□□□□ 0.14
GYPC-205ENST00000464053 RSAD2Q8WXG1 361 aa15.9■□□□□ 0.14
GYPC-205ENST00000464053 PLD4Q96BZ4 506 aa15.9■□□□□ 0.14
GYPC-205ENST00000464053 TIFAQ96CG3 184 aa15.9■□□□□ 0.14
GYPC-205ENST00000464053 GDAP1L1Q96MZ0 367 aa15.9■□□□□ 0.14
GYPC-205ENST00000464053 LGMNQ99538 433 aa15.9■□□□□ 0.14
GYPC-205ENST00000464053 FAM114A2Q9NRY5 505 aa15.9■□□□□ 0.14
GYPC-205ENST00000464053 FAM153AQ9UHL3 310 aa15.9■□□□□ 0.14
GYPC-205ENST00000464053 CCDC195A0A1B0GUA6 201 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 BCLAF3A2AJT9 711 aaKnown RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 TP73O15350 636 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 ACSL4O60488 711 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 MOSPD3O75425 235 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 CNTN5O94779 1100 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 HNRNPA1P09651 372 aaKnown RBP eCLIP15.89■□□□□ 0.13
GYPC-205ENST00000464053 PTPN2P17706 415 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 CDC25CP30307 473 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 CORO1AP31146 461 aaKnown RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 SLC6A4P31645 630 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 HTR7P34969 479 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 HARS2P49590 506 aaKnown RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 EPHA5P54756 1037 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 XRCC4Q13426 336 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 CUL1Q13616 776 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 HLTFQ14527 1009 aaKnown RBP eCLIP15.89■□□□□ 0.13
GYPC-205ENST00000464053 SLC5A9Q2M3M2 681 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 ALFQ53S48 1182 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 FAM133BQ5BKY9 247 aaKnown RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 BEND6Q5SZJ8 279 aaPredicted RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 ZDHHC24Q6UX98 284 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 VN1R2Q8NFZ6 395 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 HNRNPLLQ8WVV9 542 aaKnown RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 ZNF707Q96C28 371 aaPredicted RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 CELF6Q96J87 481 aaKnown RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 QKIQ96PU8 341 aaKnown RBP eCLIP15.89■□□□□ 0.13
GYPC-205ENST00000464053 CPQQ9Y646 472 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 IGLV3-10A0A075B6K4 115 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 SCAMP3O14828 347 aaKnown RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 KCNN4O15554 427 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 RHOP08100 348 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 VAV1P15498 845 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 TACR2P21452 398 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 ADCY8P40145 1251 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 SMAD3P84022 425 aaKnown RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 SLC45A4Q5BKX6 768 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 RFWD3Q6PCD5 774 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 NLRP14Q86W24 1093 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 CHSY1Q86X52 802 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 C12orf76Q8N812 135 aaPredicted RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 SLC46A2Q9BY10 475 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 PRKD2Q9BZL6 878 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 PRDM12Q9H4Q4 367 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 CATSPERBQ9H7T0 1116 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 ZDHHC18Q9NUE0 388 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 ZNF446Q9NWS9 450 aa15.89■□□□□ 0.13
GYPC-205ENST00000464053 AGO1Q9UL18 857 aaKnown RBP15.89■□□□□ 0.13
GYPC-205ENST00000464053 PDE4DIPQ5VU43 2346 aa15.88■□□□□ 0.13
GYPC-205ENST00000464053 FGF10O15520 208 aaPredicted RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 ERLIN1O75477 346 aa15.88■□□□□ 0.13
GYPC-205ENST00000464053 RPL22P35268 128 aaKnown RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 PLTPP55058 493 aa15.88■□□□□ 0.13
GYPC-205ENST00000464053 LRRC31Q6UY01 552 aa15.88■□□□□ 0.13
GYPC-205ENST00000464053 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
GYPC-205ENST00000464053 PDZD4Q76G19 769 aaPredicted RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 BZW1Q7L1Q6 419 aaKnown RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 GRASPQ7Z6J2 395 aaPredicted RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 CIR1Q86X95 450 aaPredicted RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 CDKL3Q8IVW4 592 aaPredicted RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 RTL3Q8N8U3 475 aaKnown RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 CCDC89Q8N998 374 aa15.88■□□□□ 0.13
GYPC-205ENST00000464053 TFB1MQ8WVM0 346 aaKnown RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 GCNAQ96QF7 691 aa15.88■□□□□ 0.13
GYPC-205ENST00000464053 SMG9Q9H0W8 520 aaKnown RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 PCDH9Q9HC56 1237 aa15.88■□□□□ 0.13
GYPC-205ENST00000464053 ZDHHC7Q9NXF8 308 aa15.88■□□□□ 0.13
GYPC-205ENST00000464053 PPARGC1AQ9UBK2 798 aaKnown RBP15.88■□□□□ 0.13
GYPC-205ENST00000464053 REV3LO60673 3130 aa15.88■□□□□ 0.13
GYPC-205ENST00000464053 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 DRGXA6NNA5 263 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 TRDMT1O14717 391 aaKnown RBP15.87■□□□□ 0.13
GYPC-205ENST00000464053 GREM1O60565 184 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 XYLBO75191 536 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 CKMP06732 381 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 STIP1P31948 543 aaKnown RBP15.87■□□□□ 0.13
GYPC-205ENST00000464053 GPS1Q13098 491 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 KCNC3Q14003 757 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 PDK1Q15118 436 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 PRKD1Q15139 912 aaPredicted RBP15.87■□□□□ 0.13
GYPC-205ENST00000464053 TEAD2Q15562 447 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 P3H1Q32P28 736 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 TFAP2DQ7Z6R9 452 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 ARHGAP12Q8IWW6 846 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 LGI2Q8N0V4 545 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 TAB3Q8N5C8 712 aaPredicted RBP15.87■□□□□ 0.13
GYPC-205ENST00000464053 FBXO25Q8TCJ0 367 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 DEPDC1BQ8WUY9 529 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 RTP4Q96DX8 246 aa15.87■□□□□ 0.13
GYPC-205ENST00000464053 SNF8Q96H20 258 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms