RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 MRPS21P82921 87 aaKnown RBP20.42■□□□□ 0.86
COL9A3-204ENST00000463487 ZNF252P-AS1Q0IIN9 211 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 ZNF177Q13360 481 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-204ENST00000463487 HADHQ16836 314 aaKnown RBP20.42■□□□□ 0.86
COL9A3-204ENST00000463487 RNF43Q68DV7 783 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 CHST9Q7L1S5 443 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 AHI1Q8N157 1196 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 CCDC185Q8N715 623 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 DTWD2Q8NBA8 298 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 SLC35G2Q8TBE7 412 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 EPAS1Q99814 870 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 ABCB8Q9NUT2 735 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 SPATA6Q9NWH7 488 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-204ENST00000463487 KIAA1522Q9P206 1035 aaPredicted RBP20.42■□□□□ 0.86
COL9A3-204ENST00000463487 PPARGC1AQ9UBK2 798 aaKnown RBP20.42■□□□□ 0.86
COL9A3-204ENST00000463487 GGA2Q9UJY4 613 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 USP18Q9UMW8 372 aa20.42■□□□□ 0.86
COL9A3-204ENST00000463487 NPC1O15118 1278 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 SRGAP2O75044 1071 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 LRCH4O75427 683 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 MIPP30301 263 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 HTR7P34969 479 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 GGCXP38435 758 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 ARHGAP25P42331 645 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 SSR1P43307 286 aaKnown RBP20.41■□□□□ 0.86
COL9A3-204ENST00000463487 CCR3P51677 355 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 FZD5Q13467 585 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 SLC12A1Q13621 1099 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 DMC1Q14565 340 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 C5orf22Q49AR2 442 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 ERMARDQ5T6L9 678 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 CCAR2Q8N163 923 aaKnown RBP20.41■□□□□ 0.86
COL9A3-204ENST00000463487 SPEM1Q8N4L4 309 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 TBC1D31Q96DN5 1066 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 CALR3Q96L12 384 aaKnown RBP20.41■□□□□ 0.86
COL9A3-204ENST00000463487 ZYG11BQ9C0D3 744 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 ANLNQ9NQW6 1124 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 DONSONQ9NYP3 566 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 DLGAP2Q9P1A6 1054 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 PCSK1NQ9UHG2 260 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 FZD10Q9ULW2 581 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 AP4E1Q9UPM8 1137 aa20.41■□□□□ 0.86
COL9A3-204ENST00000463487 IGLV3-10A0A075B6K4 115 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 DRGXA6NNA5 263 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 K7EQS6 105 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 LAMTOR5O43504 91 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 MTA2O94776 668 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 ATP5BP06576 529 aaKnown RBP20.4■□□□□ 0.86
COL9A3-204ENST00000463487 PABPC1P11940 636 aaKnown RBP20.4■□□□□ 0.86
COL9A3-204ENST00000463487 HLA-FP30511 346 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 L1CAMP32004 1257 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 MAN1A1P33908 653 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 ZNF135P52742 658 aaPredicted RBP20.4■□□□□ 0.86
COL9A3-204ENST00000463487 SEC13P55735 322 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 GSE1Q14687 1217 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 RAB6CQ53S08 254 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 BOLA3Q53S33 107 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 SDE2Q6IQ49 451 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 RWDD4Q6NW29 188 aaKnown RBP20.4■□□□□ 0.86
COL9A3-204ENST00000463487 KIAA1328Q86T90 577 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.4■□□□□ 0.86
COL9A3-204ENST00000463487 RPLP0P6Q8NHW5 317 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 IGSF8Q969P0 613 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 CIPCQ9C0C6 399 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 RAB6CQ9H0N0 254 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 ZDBF2Q9HCK1 2354 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 TMPRSS4Q9NRS4 437 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 STARD13Q9Y3M8 1113 aa20.4■□□□□ 0.86
COL9A3-204ENST00000463487 A0A0A6YYK5 440 aaPredicted RBP20.39■□□□□ 0.85
COL9A3-204ENST00000463487 CHURC1-FNTBB4DL54 471 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 I6L893 689 aaPredicted RBP20.39■□□□□ 0.85
COL9A3-204ENST00000463487 PROSCO94903 275 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 NOP2P46087 812 aaKnown RBP20.39■□□□□ 0.85
COL9A3-204ENST00000463487 TCEAL1Q15170 157 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 GEN1Q17RS7 908 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 C2orf27AQ580R0 203 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 C6orf118Q5T5N4 469 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 RAD9BQ6WBX8 426 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 Q6ZS52 159 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 C14orf80Q86SX3 495 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 SETD3Q86TU7 594 aaPredicted RBP20.39■□□□□ 0.85
COL9A3-204ENST00000463487 CIR1Q86X95 450 aaPredicted RBP20.39■□□□□ 0.85
COL9A3-204ENST00000463487 TMEM139Q8IV31 216 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 ZNF513Q8N8E2 541 aaPredicted RBP20.39■□□□□ 0.85
COL9A3-204ENST00000463487 USP33Q8TEY7 942 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 MYEOVQ96EZ4 313 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 BTBD6Q96KE9 485 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 DHX35Q9H5Z1 703 aaKnown RBP20.39■□□□□ 0.85
COL9A3-204ENST00000463487 OSGEPQ9NPF4 335 aa20.39■□□□□ 0.85
COL9A3-204ENST00000463487 TRIM24O15164 1050 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 ARHGAP6O43182 974 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 POLR2EP19388 210 aaKnown RBP20.38■□□□□ 0.85
COL9A3-204ENST00000463487 OR1E1P30953 314 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 TIE1P35590 1138 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 MTAPQ13126 283 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 MESDQ14696 234 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 EOGTQ5NDL2 527 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 MAMSTRQ6ZN01 415 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 C1orf210Q8IVY1 113 aa20.38■□□□□ 0.85
COL9A3-204ENST00000463487 ZNF683Q8IZ20 524 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms