RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 LIMS2Q7Z4I7 341 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 ZNF280BQ86YH2 543 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 MYLK4Q86YV6 388 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 CRYBG2Q8N1P7 616 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 TOP6BLQ8N6T0 577 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 BANPQ8N9N5 519 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 NMD3Q96D46 503 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 SLITRK1Q96PX8 696 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 PEBP4Q96S96 227 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 PAFAH2Q99487 392 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 MED10Q9BTT4 135 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 CRTAC1Q9NQ79 661 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 SAE1Q9UBE0 346 aaPredicted RBP12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
TNRC6A-204ENST00000462400 hCG_2014768A0A024R1R8 64 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 LIASO43766 372 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 ZNF623O75123 536 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 IMPDH2P12268 514 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 PTPN1P18031 435 aaKnown RBP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 WARSP23381 471 aaKnown RBP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 GATMP50440 423 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 TAP1Q03518 808 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 DEUP1Q05D60 604 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 MTM1Q13496 603 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 TRMT5Q32P41 509 aaKnown RBP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 ARHGAP17Q68EM7 881 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 OLFML1Q6UWY5 402 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 PAQR9Q6ZVX9 377 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 RASSF3Q86WH2 238 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 ULK2Q8IYT8 1036 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 ANKRD52Q8NB46 1076 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 STKLD1Q8NE28 680 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 KHSRPQ92945 711 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■□ 21.9
TNRC6A-204ENST00000462400 TSEN34Q9BSV6 310 aaKnown RBP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 RNF208Q9H0X6 261 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 C10orf88Q9H8K7 445 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 GPATCH2LQ9NWQ4 482 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 ZSCAN9O15535 394 aaPredicted RBP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 TPD52L2O43399 206 aaKnown RBP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 LPXNO60711 386 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 NBNO60934 754 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 IFNB1P01574 187 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 PABPC4LP0CB38 370 aaKnown RBP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 FAM200BP0CF97 657 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 VAV1P15498 845 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 GPD1P21695 349 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 GRIA2P42262 883 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 NDUFV1P49821 464 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 ACTR3P61158 418 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 BST2Q10589 180 aaKnown RBP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 MORF4L2Q15014 288 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 PRKD1Q15139 912 aaPredicted RBP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 TCTN1Q2MV58 587 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 CLLU1OSQ5K130 101 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 SCYL2Q6P3W7 929 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 CD300LGQ6UXG3 332 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 SPOCD1Q6ZMY3 1216 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 SATL1Q86VE3 508 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 TREML1Q86YW5 311 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC43A3Q8NBI5 491 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 EXD1Q8NHP7 514 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 SCLYQ96I15 445 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 FAM111AQ96PZ2 611 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 TMEM209Q96SK2 561 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC4A5Q9BY07 1137 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 MAGEB5Q9BZ81 275 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 PPCSQ9HAB8 311 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 NGRNQ9NPE2 291 aaKnown RBP12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 TMEM30AQ9NV96 361 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 CLIC5Q9NZA1 410 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 HCSTQ9UBK5 93 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 SLC7A8Q9UHI5 535 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 TBC1D30Q9Y2I9 924 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 CLUHO75153 1309 aa12.34□□□□□ -0.43
TNRC6A-204ENST00000462400 C2CD4BA6NLJ0 364 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 DDHD2O94830 711 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 OR6B1O95007 311 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 TGDSO95455 350 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 BCAT1P54687 386 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 BCAR1P56945 870 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 MAP3K7CLP57077 242 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 GAD2Q05329 585 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 MAP7Q14244 749 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 GPNMBQ14956 572 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 STILQ15468 1287 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 ACAD11Q709F0 780 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 LRRC8DQ7L1W4 858 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 ZNF598Q86UK7 904 aaKnown RBP12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 PIGZQ86VD9 579 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 PYROXD1Q8WU10 500 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 MPP4Q96JB8 637 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 KCNK16Q96T55 309 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 RHBDL2Q9NX52 303 aa12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 PPARGC1AQ9UBK2 798 aaKnown RBP12.33□□□□□ -0.43
TNRC6A-204ENST00000462400 SCN5AQ14524 2016 aa12.33□□□□□ -0.44
TNRC6A-204ENST00000462400 C9IYK1 514 aa12.33□□□□□ -0.44
TNRC6A-204ENST00000462400 GABRDO14764 452 aa12.33□□□□□ -0.44
TNRC6A-204ENST00000462400 PFDN1O60925 122 aa12.33□□□□□ -0.44
TNRC6A-204ENST00000462400 TM7SF2O76062 418 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms