RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 VITQ6UXI7 678 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 NPNTQ6UXI9 565 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 TFAP2DQ7Z6R9 452 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 CCDC33Q8N5R6 958 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 BPIFB1Q8TDL5 484 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 FGF14Q92915 247 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 FAM118BQ9BPY3 351 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 RPP25Q9BUL9 199 aaKnown RBP13.9□□□□□ -0.18
PBRM1-219ENST00000462207 SAE1Q9UBE0 346 aaPredicted RBP13.9□□□□□ -0.18
PBRM1-219ENST00000462207 CDC23Q9UJX2 597 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 R3HDM2Q9Y2K5 976 aaKnown RBP13.9□□□□□ -0.18
PBRM1-219ENST00000462207 NR2E1Q9Y466 385 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 IGLV3-10A0A075B6K4 115 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 C2CD4DB7Z1M9 353 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
PBRM1-219ENST00000462207 GFRA2O00451 464 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 DCLK1O15075 740 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 MAP3K6O95382 1288 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 MTA1Q13330 715 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 KLF1Q13351 362 aaPredicted RBP13.9□□□□□ -0.18
PBRM1-219ENST00000462207 GRM2Q14416 872 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 LONRF2Q1L5Z9 754 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 LEXMQ3ZCV2 418 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 NCBP2-AS2Q69YL0 99 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 TPGS1Q6ZTW0 290 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 NPWQ8N729 165 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 PLD5Q8N7P1 536 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 TDRD5Q8NAT2 981 aaKnown RBP13.9□□□□□ -0.18
PBRM1-219ENST00000462207 AP1M1Q9BXS5 423 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 ZFP14Q9HCL3 533 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 NDFIP2Q9NV92 336 aa13.9□□□□□ -0.18
PBRM1-219ENST00000462207 ZFP37Q9Y6Q3 630 aaPredicted RBP13.9□□□□□ -0.18
PBRM1-219ENST00000462207 XIRP2A4UGR9 3374 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 KIF26AQ9ULI4 1882 aaPredicted RBP13.89□□□□□ -0.19
PBRM1-219ENST00000462207 ZNF487B1APH4 448 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 MFSD11O43934 449 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 PECAM1P16284 738 aaPredicted RBP13.89□□□□□ -0.19
PBRM1-219ENST00000462207 CETN2P41208 172 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 HCAR3P49019 387 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 SIX1Q15475 284 aaPredicted RBP13.89□□□□□ -0.19
PBRM1-219ENST00000462207 CCDC181Q5TID7 509 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 SLC9A4Q6AI14 798 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 C1orf228Q6PIY5 440 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 LRRC31Q6UY01 552 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 BBS12Q6ZW61 710 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 OTOP3Q7RTS5 596 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 NLRP14Q86W24 1093 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 VSIG1Q86XK7 387 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 TP53INP2Q8IXH6 220 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 ACTRT1Q8TDG2 376 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.89□□□□□ -0.19
PBRM1-219ENST00000462207 MAK16Q9BXY0 300 aaKnown RBP13.89□□□□□ -0.19
PBRM1-219ENST00000462207 ZYG11BQ9C0D3 744 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 STIM2Q9P246 746 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 EPS15L1Q9UBC2 864 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 ZNF510Q9Y2H8 683 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 C5orf42Q9H799 3197 aa13.89□□□□□ -0.19
PBRM1-219ENST00000462207 DRGXA6NNA5 263 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 APOL1O14791 398 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 ARSAP15289 507 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 GBE1Q04446 702 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 PTCRAQ6ISU1 281 aaPredicted RBP13.88□□□□□ -0.19
PBRM1-219ENST00000462207 TMEM25Q86YD3 366 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 CPXM2Q8N436 756 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 RSAD2Q8WXG1 361 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 ATG4AQ8WYN0 398 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 PLK2Q9NYY3 685 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 PPARGC1AQ9UBK2 798 aaKnown RBP13.88□□□□□ -0.19
PBRM1-219ENST00000462207 ZNF212Q9UDV6 495 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 TTC7AQ9ULT0 858 aaPredicted RBP13.88□□□□□ -0.19
PBRM1-219ENST00000462207 NUMBLQ9Y6R0 609 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 TBL1XO60907 577 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 IL9P15248 144 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 NUMBP49757 651 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 ZNF135P52742 658 aaPredicted RBP13.88□□□□□ -0.19
PBRM1-219ENST00000462207 HTR4Q13639 388 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 TFDP2Q14188 446 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 SMAD2Q15796 467 aaKnown RBP13.88□□□□□ -0.19
PBRM1-219ENST00000462207 KCTD19Q17RG1 926 aaPredicted RBP13.88□□□□□ -0.19
PBRM1-219ENST00000462207 C5orf22Q49AR2 442 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 RTL3Q8N8U3 475 aaKnown RBP13.88□□□□□ -0.19
PBRM1-219ENST00000462207 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 OSCP1Q8WVF1 389 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 ELSPBP1Q96BH3 223 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 CELF6Q96J87 481 aaKnown RBP13.88□□□□□ -0.19
PBRM1-219ENST00000462207 DDX50Q9BQ39 737 aaKnown RBP13.88□□□□□ -0.19
PBRM1-219ENST00000462207 KLC2Q9H0B6 622 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 DUS2Q9NX74 493 aaKnown RBP13.88□□□□□ -0.19
PBRM1-219ENST00000462207 OBP2AQ9NY56 170 aa13.88□□□□□ -0.19
PBRM1-219ENST00000462207 COL4A3Q01955 1670 aa13.87□□□□□ -0.19
PBRM1-219ENST00000462207 FGF10O15520 208 aaPredicted RBP13.87□□□□□ -0.19
PBRM1-219ENST00000462207 TJP3O95049 919 aa13.87□□□□□ -0.19
PBRM1-219ENST00000462207 RHOQP17081 205 aa13.87□□□□□ -0.19
PBRM1-219ENST00000462207 HTR7P34969 479 aa13.87□□□□□ -0.19
PBRM1-219ENST00000462207 CHKAP35790 457 aa13.87□□□□□ -0.19
PBRM1-219ENST00000462207 IFNAR2P48551 515 aa13.87□□□□□ -0.19
PBRM1-219ENST00000462207 TNK2Q07912 1038 aa13.87□□□□□ -0.19
PBRM1-219ENST00000462207 SLC10A2Q12908 348 aaPredicted RBP13.87□□□□□ -0.19
PBRM1-219ENST00000462207 WHAMMP3Q1A5X7 153 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms