RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 MRPL38Q96DV4 380 aaKnown RBP6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 RIPOR3Q96MK2 946 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 KCTD15Q96SI1 283 aaPredicted RBP6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 FMO2Q99518 471 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 TMEM121Q9BTD3 319 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 VN1R3Q9BXE9 311 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 PBX4Q9BYU1 374 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 PRKD2Q9BZL6 878 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 STMN4Q9H169 189 aaPredicted RBP6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 MUC3BQ9H195 1237 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 NSUN3Q9H649 340 aaKnown RBP6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 TASP1Q9H6P5 420 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 CCSER2Q9H7U1 834 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 KIF9Q9HAQ2 790 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 PCDH9Q9HC56 1237 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 LMCD1Q9NZU5 365 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 KLHL8Q9P2G9 620 aaPredicted RBP6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 PPARGC1AQ9UBK2 798 aaKnown RBP6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 VANGL2Q9ULK5 521 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 TPX2Q9ULW0 747 aaKnown RBP6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 AAR2Q9Y312 384 aaKnown RBP6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 IKBKGQ9Y6K9 419 aa6.01□□□□□ -1.45
RNU1-88P-201ENST00000459274 HELZP42694 1942 aaKnown RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 MIA3Q5JRA6 1907 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 A0A1W2PPC1 479 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 A0A1W2PRU2 124 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 E2F8A0AVK6 867 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZSCAN5CA6NGD5 496 aaPredicted RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 C3orf70A6NLC5 250 aaPredicted RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ERI2A8K979 691 aaKnown RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 HIDE1A8MVS5 230 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 PER2O15055 1255 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 OPHN1O60890 802 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 RAMP2O60895 175 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 LILRB3O75022 631 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ANXA9O76027 345 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 LRIG2O94898 1065 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 LUC7L3O95232 432 aaKnown RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 FYNP06241 537 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 IVLP07476 585 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 RHOP08100 348 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZDHHC11BP0C7U3 371 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TCF4P15884 667 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TFE3P19532 575 aaPredicted RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TACR2P21452 398 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 IGFBP4P22692 258 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 CES1P23141 567 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 NFKBIAP25963 317 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TNFRSF8P28908 595 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ATP5DP30049 168 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 GBP2P32456 591 aaPredicted RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 KCNJ1P48048 391 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 VPS41P49754 854 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ARL4CP56559 192 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 KLF1Q13351 362 aaPredicted RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 LAMB3Q13751 1172 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 AUHQ13825 339 aaKnown RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 PTK6Q13882 451 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZNF235Q14590 738 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 PAFAH1B3Q15102 231 aaKnown RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TRIP13Q15645 432 aaPredicted RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 PARP15Q460N3 678 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 MS4A13Q5J8X5 152 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZNF697Q5TEC3 545 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 MARC1Q5VT66 337 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 IZUMO3Q5VZ72 239 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 RAP1GAP2Q684P5 730 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TXNDC8Q6A555 127 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TXNRD3NBQ6F5E7 133 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 AADACL2Q6P093 401 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 CCNI2Q6ZMN8 369 aaPredicted RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 LINC00523Q86TU6 105 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 SETD3Q86TU7 594 aaPredicted RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 CCDC25Q86WR0 208 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 PALM2Q8IXS6 379 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 CCDC13Q8IYE1 715 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 CMTM8Q8IZV2 173 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 NDUFAF2Q8N183 169 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 PYROXD2Q8N2H3 581 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ALLCQ8N6M5 410 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ARFGAP1Q8N6T3 406 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 CELF5Q8N6W0 485 aaKnown RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 FAM71DQ8N9W8 422 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 NOA1Q8NC60 698 aaKnown RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 PCDH19Q8TAB3 1148 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 FAM71BQ8TC56 605 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ATG4AQ8WYN0 398 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 VWCEQ96DN2 955 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TTC25Q96NG3 672 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 XPO6Q96QU8 1125 aaKnown RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 PEBP4Q96S96 227 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 GDF15Q99988 308 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 FSD1LQ9BXM9 530 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 MAGEH1Q9H213 219 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ZNF576Q9H609 170 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 NMUR1Q9HB89 426 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 WDR6Q9NNW5 1121 aaKnown RBP6□□□□□ -1.45
RNU1-88P-201ENST00000459274 ARHGEF4Q9NR80 690 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TDP1Q9NUW8 608 aa6□□□□□ -1.45
RNU1-88P-201ENST00000459274 TMEM30AQ9NV96 361 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms