RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 PAFAH1B3Q15102 231 aaKnown RBP11.6□□□□□ -0.55
TRAF4-206ENST00000454852 AAK1Q2M2I8 961 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 MPPE1Q53F39 396 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 ODF2Q5BJF6 829 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 SEL1L2Q5TEA6 688 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 FYB2Q5VWT5 728 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 PARM1Q6UWI2 310 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 BBS12Q6ZW61 710 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 SLC13A5Q86YT5 568 aaPredicted RBP11.6□□□□□ -0.55
TRAF4-206ENST00000454852 CREG2Q8IUH2 290 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 LZTR1Q8N653 840 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 PQLC3Q8N755 202 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 RTL3Q8N8U3 475 aaKnown RBP11.6□□□□□ -0.55
TRAF4-206ENST00000454852 COG1Q8WTW3 980 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 IRF7Q92985 503 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 IGSF8Q969P0 613 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 RNF25Q96BH1 459 aaPredicted RBP11.6□□□□□ -0.55
TRAF4-206ENST00000454852 CALN1Q9BXU9 219 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 CATSPERBQ9H7T0 1116 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 TMEM248Q9NWD8 314 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 STIM2Q9P246 746 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 VANGL2Q9ULK5 521 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 TBC1D30Q9Y2I9 924 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 RAD54BQ9Y620 910 aa11.6□□□□□ -0.55
TRAF4-206ENST00000454852 XIRP2A4UGR9 3374 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 PI4K2BG5E9Z4 385 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 ARNTLO00327 626 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 HOXC11O43248 304 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-206ENST00000454852 CREB3O43889 395 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 TJP3O95049 919 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 NFATC1O95644 943 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 ERCC2P18074 760 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 TGM2P21980 687 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 EPHB2P29323 1055 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 IFNAR2P48551 515 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 MMRN1Q13201 1228 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 ZNF211Q13398 564 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-206ENST00000454852 ZFYVE27Q5T4F4 411 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 AFMIDQ63HM1 303 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 ZNF783Q6ZMS7 281 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 ZNF572Q7Z3I7 529 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-206ENST00000454852 SETD3Q86TU7 594 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-206ENST00000454852 CCDC50Q8IVM0 306 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 LGI2Q8N0V4 545 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 UMODL1-AS1Q8N2C9 162 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 PLD5Q8N7P1 536 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 ZNF557Q8N988 423 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-206ENST00000454852 MAIP1Q8WWC4 291 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 ATP2A3Q93084 1043 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 TMA16Q96EY4 203 aaKnown RBP11.59□□□□□ -0.55
TRAF4-206ENST00000454852 MYEOVQ96EZ4 313 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 RPRD1AQ96P16 312 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-206ENST00000454852 NAP1L3Q99457 506 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-206ENST00000454852 FRMD8P1Q9BZ68 369 aaPredicted RBP11.59□□□□□ -0.55
TRAF4-206ENST00000454852 PLA2G2FQ9BZM2 168 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 KLC2Q9H0B6 622 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 LINC00597Q9H2U6 94 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 SPHK2Q9NRA0 654 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 DUS2Q9NX74 493 aaKnown RBP11.59□□□□□ -0.55
TRAF4-206ENST00000454852 THEGQ9P2T0 379 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 CDC23Q9UJX2 597 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 FBXO10Q9UK96 956 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 SNX10Q9Y5X0 201 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 NUMBLQ9Y6R0 609 aa11.59□□□□□ -0.55
TRAF4-206ENST00000454852 COL4A2P08572 1712 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 CHD5Q8TDI0 1954 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 CXorf51AA0A1B0GTR3 108 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 TYW5A2RUC4 315 aaKnown RBP11.58□□□□□ -0.56
TRAF4-206ENST00000454852 APOC4-APOC2K7ER74 178 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 CEP104O60308 925 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 SRGAP2O75044 1071 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 APOC2P02655 101 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 CYBBP04839 570 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 IL9P15248 144 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 AMPD1P23109 780 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 HOXD9P28356 352 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-206ENST00000454852 CXCR5P32302 372 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 SERPINB6P35237 376 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 GGCXP38435 758 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 NR2C2P49116 596 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 DNA2P51530 1060 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 RPS24P62847 133 aaKnown RBP11.58□□□□□ -0.56
TRAF4-206ENST00000454852 ADCY2Q08462 1091 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 DHCR24Q15392 516 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 SIX1Q15475 284 aaPredicted RBP11.58□□□□□ -0.56
TRAF4-206ENST00000454852 ALFQ53S48 1182 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 NCBP2-AS2Q69YL0 99 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 AADACL2Q6P093 401 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 RFWD3Q6PCD5 774 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 RHBDF2Q6PJF5 856 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 ADHFE1Q8IWW8 467 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 ASIC4Q96FT7 647 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 P2RY11Q96G91 374 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 PSMB7Q99436 277 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 HERPUD2Q9BSE4 406 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 TRMT61BQ9BVS5 477 aaKnown RBP11.58□□□□□ -0.56
TRAF4-206ENST00000454852 MAK16Q9BXY0 300 aaKnown RBP11.58□□□□□ -0.56
TRAF4-206ENST00000454852 SLC2A11Q9BYW1 496 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 HPS4Q9NQG7 708 aa11.58□□□□□ -0.56
TRAF4-206ENST00000454852 WNT6Q9Y6F9 365 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms