RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 CCDC40Q4G0X9 1142 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 COBLL1Q53SF7 1204 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 KCNT1Q5JUK3 1230 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 MMS22LQ6ZRQ5 1243 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 UNC45BQ8IWX7 931 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 SCML4Q8N228 414 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 ADAM32Q8TC27 787 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 DQX1Q8TE96 717 aaKnown RBP12.12□□□□□ -0.47
GARNL3-210ENST00000453030 SLC35F5Q8WV83 523 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 IRGQQ8WZA9 623 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 SMARCE1Q969G3 411 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 IGSF8Q969P0 613 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 FAM149B1Q96BN6 582 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 MYO19Q96H55 970 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 SLC6A18Q96N87 628 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 GSDMAQ96QA5 445 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 NUCKS1Q9H1E3 243 aaKnown RBP12.12□□□□□ -0.47
GARNL3-210ENST00000453030 PABPC3Q9H361 631 aaKnown RBP12.12□□□□□ -0.47
GARNL3-210ENST00000453030 SGK2Q9HBY8 427 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 FBXL12Q9NXK8 326 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 KIAA1257Q9ULG3 409 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 RAXQ9Y2V3 346 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 TDRD6O60522 2096 aaKnown RBP12.12□□□□□ -0.47
GARNL3-210ENST00000453030 ARID1BQ8NFD5 2236 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-210ENST00000453030 A0A1W2PP55 124 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 RNF225M0QZC1 329 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-210ENST00000453030 PSMA7O14818 248 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 MID1O15344 667 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 SMC2O95347 1197 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 IGHV4-34P06331 123 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-210ENST00000453030 GRK6P43250 576 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 C21orf59P57076 290 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 CST6Q15828 149 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 HNRNPA1L2Q32P51 320 aaKnown RBP12.11□□□□□ -0.47
GARNL3-210ENST00000453030 MPP7Q5T2T1 576 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 KIAA0895LQ68EN5 471 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 ISM2Q6H9L7 571 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 KLHL10Q6JEL2 608 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 NCEH1Q6PIU2 408 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 RRAGAQ7L523 313 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 TMPRSS7Q7RTY8 843 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 ARHGEF19Q8IW93 802 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 CFAP52Q8N1V2 620 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 ZNF557Q8N988 423 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-210ENST00000453030 LMLNQ96KR4 655 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 FCRL2Q96LA5 508 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-210ENST00000453030 SERPINB11Q96P15 392 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 ORAI3Q9BRQ5 295 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 RSPH9Q9H1X1 276 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-210ENST00000453030 OSGEPQ9NPF4 335 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 ST7Q9NRC1 585 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 KIAA1522Q9P206 1035 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-210ENST00000453030 SUN2Q9UH99 717 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 INTS6Q9UL03 887 aaKnown RBP12.11□□□□□ -0.47
GARNL3-210ENST00000453030 NCKAP1Q9Y2A7 1128 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 CEP83Q9Y592 693 aa12.11□□□□□ -0.47
GARNL3-210ENST00000453030 SHROOM3Q8TF72 1996 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 ASXL3Q9C0F0 2248 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 GCN1Q92616 2671 aaKnown RBP12.1□□□□□ -0.47
GARNL3-210ENST00000453030 GOLGA6L4A6NEF3 574 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 RNASEH1O60930 286 aaKnown RBP12.1□□□□□ -0.47
GARNL3-210ENST00000453030 RNASEH2AO75792 299 aaKnown RBP12.1□□□□□ -0.47
GARNL3-210ENST00000453030 DKK1O94907 266 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 FBXO21O94952 628 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 ASLP04424 464 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 FYNP06241 537 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 C7P10643 843 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 CTSKP43235 329 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 PSMD8P48556 350 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 STIM1Q13586 685 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 ACAP1Q15027 740 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 STILQ15468 1287 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 CNGA2Q16280 664 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 INAVAQ3KP66 663 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 FSCBQ5H9T9 825 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 PITRM1Q5JRX3 1037 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 DBX2Q6ZNG2 339 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 USP30Q70CQ3 517 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 PDZD3Q86UT5 571 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 TAC4Q86UU9 113 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 CHSY1Q86X52 802 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 GATAD2AQ86YP4 633 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 MMAAQ8IVH4 418 aaKnown RBP12.1□□□□□ -0.47
GARNL3-210ENST00000453030 CCDC117Q8IWD4 279 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-210ENST00000453030 FIBINQ8TAL6 211 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 HNRNPLLQ8WVV9 542 aaKnown RBP12.1□□□□□ -0.47
GARNL3-210ENST00000453030 TTC17Q96AE7 1141 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 MRGPRX3Q96LB0 322 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 HSFY1Q96LI6 401 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 DDX50Q9BQ39 737 aaKnown RBP12.1□□□□□ -0.47
GARNL3-210ENST00000453030 ACE2Q9BYF1 805 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-210ENST00000453030 METTL14Q9HCE5 456 aaKnown RBP12.1□□□□□ -0.47
GARNL3-210ENST00000453030 FTSJ1Q9UET6 329 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 XPO7Q9UIA9 1087 aaKnown RBP12.1□□□□□ -0.47
GARNL3-210ENST00000453030 NAALADL1Q9UQQ1 740 aa12.1□□□□□ -0.47
GARNL3-210ENST00000453030 A0A1W2PPC4 97 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 TTC34A8MYJ7 566 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 CBX4O00257 560 aa12.09□□□□□ -0.47
GARNL3-210ENST00000453030 TNFSF14O43557 240 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms