RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 ATP5BP06576 529 aaKnown RBP9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 POLR2EP19388 210 aaKnown RBP9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 CSKP41240 450 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 GRK6P43250 576 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 YWHAEP62258 255 aaKnown RBP9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 RPS24P62847 133 aaKnown RBP9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 TTC31Q49AM3 519 aaPredicted RBP9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 COBLL1Q53SF7 1204 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 NUGGCQ68CJ6 796 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 KIAA0895LQ68EN5 471 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 TMEM270Q6UE05 265 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 MFN1Q8IWA4 741 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 HNRNPLLQ8WVV9 542 aaKnown RBP9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 IRGQQ8WZA9 623 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 KAT5Q92993 513 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 TTC17Q96AE7 1141 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 FCRL2Q96LA5 508 aaPredicted RBP9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 SLC6A18Q96N87 628 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 PABPC3Q9H361 631 aaKnown RBP9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 EBF2Q9HAK2 575 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 SGK2Q9HBY8 427 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 STIM2Q9P246 746 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 URB1O60287 2271 aaKnown RBP9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 MGAQ8IWI9 3026 aa9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 ARID1BQ8NFD5 2236 aaPredicted RBP9.17□□□□□ -0.94
DEPDC1B-202ENST00000453022 TRABD2BA6NFA1 517 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 M0QYV0 167 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 MID1O15344 667 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 IRAK2O43187 625 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 PAEPP09466 180 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 TBXAS1P24557 533 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 BRD2P25440 801 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 CTSOP43234 321 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 SLC11A2P49281 568 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 GALCP54803 685 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 TBX4P57082 545 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 FKBP3Q00688 224 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 KCNJ12Q14500 433 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 SUZ12Q15022 739 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 SMAD1Q15797 465 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 HNRNPA1L2Q32P51 320 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 FSCBQ5H9T9 825 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 ZNF658Q5TYW1 1059 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 MMS22LQ6ZRQ5 1243 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 USP30Q70CQ3 517 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 UNC45BQ8IWX7 931 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 DHX40Q8IX18 779 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 FMR1NBQ8N0W7 255 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 GALNT15Q8N3T1 639 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 HJURPQ8NCD3 748 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 FIBINQ8TAL6 211 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 GOLGA1Q92805 767 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 ERCC4Q92889 916 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 AZIN2Q96A70 460 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 CRELD1Q96HD1 420 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 DCBLD2Q96PD2 775 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 BBC3Q96PG8 261 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 IRX2Q9BZI1 471 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 SCAND2PQ9GZW5 306 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 NUCKS1Q9H1E3 243 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 SCUBE2Q9NQ36 999 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 FBXL12Q9NXK8 326 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 ARMCX3Q9UH62 379 aaPredicted RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 SUN2Q9UH99 717 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 KIAA1257Q9ULG3 409 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 A0A1B0GTQ1 180 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 A0A1W2PP55 124 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 A0A1W2PPC4 97 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 FAM47DPA6NHR8 397 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 TTC34A8MYJ7 566 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 CBX4O00257 560 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 WNT9AO14904 365 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 VILLO15195 856 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 WNT1P04628 370 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 FMO5P49326 533 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 RACK1P63244 317 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 CYP4F3Q08477 520 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 ARID5BQ14865 1188 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 SHBQ15464 509 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 CST6Q15828 149 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 CCDC157Q569K6 752 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 MS4A13Q5J8X5 152 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 PITRM1Q5JRX3 1037 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 PRAMEF14Q5SWL7 426 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 C9orf64Q5T6V5 341 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 NCEH1Q6PIU2 408 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 DHRS13Q6UX07 377 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 ADAT2Q7Z6V5 191 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 GATAD2AQ86YP4 633 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 CFAP52Q8N1V2 620 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 CARNMT1Q8N4J0 409 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 AADATQ8N5Z0 425 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 LMO3Q8TAP4 145 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 SPATA20Q8TB22 786 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 DQX1Q8TE96 717 aaKnown RBP9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 SLC39A13Q96H72 371 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 TSG101Q99816 390 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 MIS12Q9H081 205 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 RMND1Q9NWS8 449 aa9.16□□□□□ -0.94
DEPDC1B-202ENST00000453022 ADAMTS1Q9UHI8 967 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms