RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 TUBB6Q9BUF5 446 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 POLR3CQ9BUI4 534 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 SPATA16Q9BXB7 569 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PITPNM3Q9BZ71 974 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 RAB34Q9BZG1 259 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PDGFDQ9GZP0 370 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 KATNBL1Q9H079 304 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 NT5C3AQ9H0P0 336 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 WNT8AQ9H1J5 351 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TAOK3Q9H2K8 898 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 DNAJC18Q9H819 358 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZNF408Q9H9D4 720 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TYW1Q9NV66 732 aaKnown RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 DMAC2Q9NW81 257 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TMEM260Q9NX78 707 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TAS2R14Q9NYV8 317 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 IL1RAPL1Q9NZN1 696 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 HSFX1Q9UBD0 423 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZNF212Q9UDV6 495 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 SCOCQ9UIL1 159 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 HAO1Q9UJM8 370 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PHTF1Q9UMS5 762 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 NAALADL1Q9UQQ1 740 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZNF510Q9Y2H8 683 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ZBTB1Q9Y2K1 713 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 NUB1Q9Y5A7 615 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 COMMD3-BMI1R4GMX3 469 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 NFASCO94856 1347 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 UMODL1Q5DID0 1318 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PASKQ96RG2 1323 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 PLIN4Q96Q06 1357 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 ABCA3Q99758 1704 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 RBBP6Q7Z6E9 1792 aaKnown RBP4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 CDK5RAP2Q96SN8 1893 aa4.34□□□□□ -1.71
HMGB3P22-202ENST00000451823 TAF1LQ8IZX4 1826 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 ZMYM2Q9UBW7 1377 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 MYO3BQ8WXR4 1341 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 FAM47DPA6NHR8 397 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 SMIM23A6NLE4 172 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 A8MXQ7 604 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 FOXO6A8MYZ6 492 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 E9PMD0 336 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 F8W8V4 182 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 PMM2O15305 246 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 TGFB1I1O43294 461 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 BUD23O43709 281 aaKnown RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 CALUO43852 315 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 CREB3O43889 395 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 MAGEC1O60732 1142 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 TBX10O75333 385 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 CSDE1O75534 798 aaKnown RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 FAM155BO75949 473 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 KRT36O76013 467 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 STK10O94804 968 aaKnown RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 ZWINTO95229 277 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 CBX6O95503 412 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 NR3C1P04150 777 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 CYP1A2P05177 515 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 LYNP07948 512 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 FGFR1P11362 822 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 IL2RBP14784 551 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 NR2F2P24468 414 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 GRK2P25098 689 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 CRABP2P29373 138 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 GRK3P35626 688 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 IGHMBP2P38935 993 aaKnown RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 GYG1P46976 350 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 CASP4P49662 377 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 CDK7P50613 346 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 CASP5P51878 434 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 SH3BGRP55822 239 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 TGFB2P61812 414 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 IL9RQ01113 521 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 SULT2A1Q06520 285 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 SF3A3Q12874 501 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 PTP4A2Q12974 167 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 RCN2Q14257 317 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 USP10Q14694 798 aaKnown RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 DRAP1Q14919 205 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 SF3B3Q15393 1217 aaKnown RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 DLGAP5Q15398 846 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 PTPROQ16827 1216 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 LIN52Q52LA3 116 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 LRRC23Q53EV4 343 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 ZC2HC1CQ53FD0 456 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 PARP10Q53GL7 1025 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 USP39Q53GS9 565 aaKnown RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 PLEKHG4Q58EX7 1191 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 C1QTNF12Q5T7M4 302 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 SOGA3Q5TF21 947 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 HHATQ5VTY9 493 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 RFWD3Q6PCD5 774 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 GJB7Q6PEY0 223 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 MOXD1Q6UVY6 613 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 NSMFQ6X4W1 530 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 Q6ZSN1 163 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 INTS8Q75QN2 995 aaKnown RBP4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 NLRP9Q7RTR0 991 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 OTOAQ7RTW8 1153 aa4.33□□□□□ -1.72
HMGB3P22-202ENST00000451823 CLNKQ7Z7G1 428 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms