RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 KDM4CQ9H3R0 1056 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 NMUR1Q9HB89 426 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 GRID1Q9ULK0 1009 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 MAD1L1Q9Y6D9 718 aa16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 MYO18AQ92614 2054 aaKnown RBP16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 COL4A4P53420 1690 aaPredicted RBP16.56■□□□□ 0.24
AP000253.1-201ENST00000449339 F5H423 210 aaPredicted RBP16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 TRDMT1O14717 391 aaKnown RBP16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 SYN3O14994 580 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 OPHN1O60890 802 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 ZWINTO95229 277 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 F9P00740 461 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 ERCC2P18074 760 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 CXCR3P49682 368 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 TPI1P60174 286 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 RSPO2Q6UXX9 243 aaPredicted RBP16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 ANKRD33Q7Z3H0 272 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 SPATA21Q7Z572 469 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 SLC26A11Q86WA9 606 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 LRRC6Q86X45 466 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 CTAGE3PQ8IX95 158 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 ALKBH8Q96BT7 664 aaKnown RBP16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 WDCPQ9H6R7 721 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 MICAL3Q7RTP6 2002 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 GOLGA8RI6L899 631 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 MSI1O43347 362 aaKnown RBP16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 SUN1O94901 812 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 CXCL10P02778 98 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 MT-ND3P03897 115 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 GALTP07902 379 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 SARNPP82979 210 aaKnown RBP16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 ACTN3Q08043 901 aaPredicted RBP16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 SLC20A2Q08357 652 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 PDK4Q16654 411 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 RTP2Q5QGT7 225 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 HHATQ5VTY9 493 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 FUT10Q6P4F1 479 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 UNC5AQ6ZN44 842 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 SCML4Q8N228 414 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 MPP5Q8N3R9 675 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 BANPQ8N9N5 519 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 RNF34Q969K3 372 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 KLF6Q99612 283 aaPredicted RBP16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 EBNA1BP2Q99848 306 aaKnown RBP16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 CEP41Q9BYV8 373 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 PITPNM3Q9BZ71 974 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 SEPT10Q9P0V9 454 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 SFMBT1Q9UHJ3 866 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 CAPN7Q9Y6W3 813 aa16.55■□□□□ 0.24
AP000253.1-201ENST00000449339 A0A1W2PQH9 124 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 APOEP02649 317 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 GSTA2P09210 222 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 FGFR3P22607 806 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 PRKCHP24723 683 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 HCAR3P49019 387 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 USP46P62068 366 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 CDK16Q00536 496 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 WASHC5Q12768 1159 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 DNAJC3Q13217 504 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 MRPL58Q14197 206 aaKnown RBP16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 LACTB2Q53H82 288 aaPredicted RBP16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 BTBD8Q5XKL5 378 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 LVRNQ6Q4G3 990 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 FAM47EQ6ZV65 393 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 PPM1NQ8N819 430 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 ACTR5Q9H9F9 607 aaPredicted RBP16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 OSER1Q9NX31 292 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 SLC27A5Q9Y2P5 690 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 NUP205Q92621 2012 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 CXorf49A8MYA2 514 aaPredicted RBP16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 CGB2Q6NT52 195 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 RGS9BPQ6ZS82 235 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 PDZD4Q76G19 769 aaPredicted RBP16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 TRPM8Q7Z2W7 1104 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 PDCD7Q8N8D1 485 aaKnown RBP16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 TCP10LQ8TDR4 215 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 SPOCK2Q92563 424 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 CASP10Q92851 521 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 TRIM56Q9BRZ2 755 aaKnown RBP16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 ATP11BQ9Y2G3 1177 aa16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 MRPL42Q9Y6G3 142 aaKnown RBP16.54■□□□□ 0.24
AP000253.1-201ENST00000449339 TM9SF1O15321 606 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 SEPT7Q16181 437 aaKnown RBP16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 NFE2Q16621 373 aaPredicted RBP16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 ZNF280DQ6N043 979 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 PRSS55Q6UWB4 352 aaPredicted RBP16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 ZNF567Q8N184 647 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 GSDMBQ8TAX9 411 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 LRRC8CQ8TDW0 803 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 GRAMD1AQ96CP6 724 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 SERAC1Q96JX3 654 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 CRISPLD1Q9H336 500 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 OR12D3Q9UGF7 316 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 PCDHB5Q9Y5E4 795 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 H0YHG0 523 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 KCNK1O00180 336 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 FAM155BO75949 473 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 IGLV3-25P01717 112 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 MLNP12872 115 aa16.53■□□□□ 0.24
AP000253.1-201ENST00000449339 ADRA1DP25100 572 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms