RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 TSPAN3O60637 253 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 PAPSS2O95340 614 aaPredicted RBP9.49□□□□□ -0.89
RFX3-207ENST00000449190 KLKB1P03952 638 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 HOXA6P31267 233 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 MAN1A1P33908 653 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 ADRA1BP35368 520 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 PCK1P35558 622 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 EIF2DP41214 584 aaKnown RBP9.49□□□□□ -0.89
RFX3-207ENST00000449190 SLC1A1P43005 524 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 HADHBP55084 474 aaKnown RBP9.49□□□□□ -0.89
RFX3-207ENST00000449190 HDAC4P56524 1084 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 OGDHQ02218 1023 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 EIF4EBP2Q13542 120 aaPredicted RBP9.49□□□□□ -0.89
RFX3-207ENST00000449190 PREPLQ4J6C6 727 aaPredicted RBP9.49□□□□□ -0.89
RFX3-207ENST00000449190 MPPE1Q53F39 396 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 BOLA3Q53S33 107 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 RABGAP1LQ5R372 815 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 ZFYVE27Q5T4F4 411 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 SH3PXD2AQ5TCZ1 1133 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 Q6ZNB5 142 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 CHSY1Q86X52 802 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 CPXM2Q8N436 756 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 RNF10Q8N5U6 811 aaKnown RBP9.49□□□□□ -0.89
RFX3-207ENST00000449190 NIPA2Q8N8Q9 360 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 ZBTB44Q8NCP5 570 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 DDI1Q8WTU0 396 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 ATRIPQ8WXE1 791 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 NKD2Q969F2 451 aaPredicted RBP9.49□□□□□ -0.89
RFX3-207ENST00000449190 WBP2Q969T9 261 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 TRIM44Q96DX7 344 aaPredicted RBP9.49□□□□□ -0.89
RFX3-207ENST00000449190 TMA16Q96EY4 203 aaKnown RBP9.49□□□□□ -0.89
RFX3-207ENST00000449190 C1orf74Q96LT6 269 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 TRIM7Q9C029 511 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 SPHK2Q9NRA0 654 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 ARHGEF38Q9NXL2 777 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 PPP2R2CQ9Y2T4 447 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 REXO2Q9Y3B8 237 aaKnown RBP9.49□□□□□ -0.89
RFX3-207ENST00000449190 PCDHGA2Q9Y5H1 932 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 PATJQ8NI35 1801 aa9.49□□□□□ -0.89
RFX3-207ENST00000449190 GOLGA6L7A0A1B0GV03 622 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 MACROD2A1Z1Q3 448 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 RCCD1A6NED2 376 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 BUB1O43683 1085 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 SPOPO43791 374 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 LILRB5O75023 590 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 PAGE1O75459 146 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 EGFP01133 1207 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 CYP17A1P05093 508 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 KRT7P08729 469 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 ADH5P11766 374 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 TACR2P21452 398 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 MIPP30301 263 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 OPRD1P41143 372 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 ATXN1P54253 815 aaKnown RBP9.48□□□□□ -0.89
RFX3-207ENST00000449190 GAB4Q2WGN9 574 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 ANO4Q32M45 955 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 LY6G5CQ5SRR4 150 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 ERMARDQ5T6L9 678 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 OTUD1Q5VV17 481 aaPredicted RBP9.48□□□□□ -0.89
RFX3-207ENST00000449190 RAP1GAP2Q684P5 730 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 TPGS1Q6ZTW0 290 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 BNIPLQ7Z465 357 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 DAAM2Q86T65 1068 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 PSTKQ8IV42 348 aaKnown RBP9.48□□□□□ -0.89
RFX3-207ENST00000449190 SYCE1Q8N0S2 351 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 LGI2Q8N0V4 545 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 ZNF557Q8N988 423 aaPredicted RBP9.48□□□□□ -0.89
RFX3-207ENST00000449190 KIAA1524Q8TCG1 905 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 NTAN1Q96AB6 310 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 XPO6Q96QU8 1125 aaKnown RBP9.48□□□□□ -0.89
RFX3-207ENST00000449190 PNKPQ96T60 521 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 BBS2Q9BXC9 721 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 LACRTQ9GZZ8 138 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 OSBPL2Q9H1P3 480 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 ZWILCHQ9H900 591 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 CALCOCO1Q9P1Z2 691 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 STIM2Q9P246 746 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 STOML2Q9UJZ1 356 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 USP18Q9UMW8 372 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 GUCA1BQ9UMX6 200 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 TFR2Q9UP52 801 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 DUSP10Q9Y6W6 482 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 CACNA1IQ9P0X4 2223 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 ZNF638Q14966 1978 aaKnown RBP9.48□□□□□ -0.89
RFX3-207ENST00000449190 COL4A3Q01955 1670 aa9.48□□□□□ -0.89
RFX3-207ENST00000449190 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.47□□□□□ -0.89
RFX3-207ENST00000449190 HOXC11O43248 304 aaPredicted RBP9.47□□□□□ -0.89
RFX3-207ENST00000449190 DAPK3O43293 454 aa9.47□□□□□ -0.89
RFX3-207ENST00000449190 BUB1BO60566 1050 aaPredicted RBP9.47□□□□□ -0.89
RFX3-207ENST00000449190 GFRA3O60609 400 aa9.47□□□□□ -0.89
RFX3-207ENST00000449190 SRGAP2O75044 1071 aa9.47□□□□□ -0.89
RFX3-207ENST00000449190 LRCH4O75427 683 aa9.47□□□□□ -0.89
RFX3-207ENST00000449190 LMNAP02545 664 aaKnown RBP9.47□□□□□ -0.89
RFX3-207ENST00000449190 TDGF1P13385 188 aa9.47□□□□□ -0.89
RFX3-207ENST00000449190 TNNT1P13805 278 aa9.47□□□□□ -0.89
RFX3-207ENST00000449190 TNFRSF4P43489 277 aa9.47□□□□□ -0.89
RFX3-207ENST00000449190 SLC6A11P48066 632 aa9.47□□□□□ -0.89
RFX3-207ENST00000449190 ZNF135P52742 658 aaPredicted RBP9.47□□□□□ -0.89
RFX3-207ENST00000449190 SATB1Q01826 763 aa9.47□□□□□ -0.89
RFX3-207ENST00000449190 ZNF252P-AS1Q0IIN9 211 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms