RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 PTGIRP43119 386 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 TUBP50607 506 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 PLK1P53350 603 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 PRKAA1Q13131 559 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 ZNF177Q13360 481 aaPredicted RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 SLC1A5Q15758 541 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 PARP6Q2NL67 630 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 SPANXN3Q5MJ09 141 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 PRAMEF19Q5SWL8 479 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 PPP1R26Q5T8A7 1209 aaPredicted RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 ZNF470Q6ECI4 717 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 TTC23LQ6PF05 361 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 KYAT3Q6YP21 454 aaKnown RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 MON1BQ7L1V2 547 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 OTOAQ7RTW8 1153 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 MFN1Q8IWA4 741 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 KYQ8NBH2 561 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 LGMNQ99538 433 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 CPNE1Q99829 537 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 RNPEPL1Q9HAU8 725 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 XPNPEP3Q9NQH7 507 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 UTP6Q9NYH9 597 aaKnown RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 SLC13A4Q9UKG4 626 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 RNF112Q9ULX5 631 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 COL14A1Q05707 1796 aaKnown RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 C2orf81A6NN90 581 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 ERI2A8K979 691 aaKnown RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 SLCO1B7G3V0H7 640 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 PEX1O43933 1283 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 FAM155BO75949 473 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 ERBB2P04626 1255 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 CYBBP04839 570 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 MPOP05164 745 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 GOT1P17174 413 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 NPY2RP49146 381 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 SLC11A2P49281 568 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 PSEN2P49810 448 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 CCDC153Q494R4 210 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 GRAMD4Q6IC98 578 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 FAR2Q96K12 515 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 PGLYRP2Q96PD5 576 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 B3GNT5Q9BYG0 378 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 NMRAL1Q9HBL8 299 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 PTPRHQ9HD43 1115 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 DDX18Q9NVP1 670 aaKnown RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 KCNK4Q9NYG8 393 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 TRHDEQ9UKU6 1024 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 KCNH4Q9UQ05 1017 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 FARP1Q9Y4F1 1045 aaPredicted RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 RPTORQ8N122 1335 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 TMEM247A6NEH6 219 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 H0Y626 953 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 UBDO15205 165 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 EDF1O60869 148 aaKnown RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 LRCH4O75427 683 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 USP1O94782 785 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 TOMM70O94826 608 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 TMCC1O94876 653 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 HSPA1AP0DMV8 641 aaKnown RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 HSPA1BP0DMV9 641 aaKnown RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 INPP1P49441 399 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 SLC25A3Q00325 362 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 NFE2Q16621 373 aaPredicted RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 MFSD5Q6N075 450 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 UNC5AQ6ZN44 842 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 LRRC74BQ6ZQY2 392 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 PIWIL2Q8TC59 973 aaKnown RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 SMARCD1Q96GM5 515 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 ZNF333Q96JL9 665 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 HSFY1Q96LI6 401 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 DHX33Q9H6R0 707 aaKnown RBP7.31□□□□□ -1.24
BEST1-202ENST00000449131 RRN3Q9NYV6 651 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 GRHL1Q9NZI5 618 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 CRLS1Q9UJA2 301 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 APPL1Q9UKG1 709 aa7.31□□□□□ -1.24
BEST1-202ENST00000449131 NR5A2O00482 541 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 DPYSL4O14531 572 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 SPTLC1O15269 473 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 TSPAN3O60637 253 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 RASSF9O75901 435 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 PIGNO95427 931 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 HNRNPCP07910 306 aaKnown RBP eCLIP7.3□□□□□ -1.24
BEST1-202ENST00000449131 SCNN1BP51168 640 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 CCNHP51946 323 aaPredicted RBP7.3□□□□□ -1.24
BEST1-202ENST00000449131 NAGLUP54802 743 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 XRCC4Q13426 336 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 GALNTL6Q49A17 601 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 IQSEC1Q6DN90 963 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 ZNF572Q7Z3I7 529 aaPredicted RBP7.3□□□□□ -1.24
BEST1-202ENST00000449131 ALYREFQ86V81 257 aaKnown RBP7.3□□□□□ -1.24
BEST1-202ENST00000449131 SNX32Q86XE0 403 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 ANKRD52Q8NB46 1076 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 EBNA1BP2Q99848 306 aaKnown RBP7.3□□□□□ -1.24
BEST1-202ENST00000449131 KLHL4Q9C0H6 718 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 APOBEC3GQ9HC16 384 aaKnown RBP7.3□□□□□ -1.24
BEST1-202ENST00000449131 MAN1C1Q9NR34 630 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 IL1RAPL1Q9NZN1 696 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 KIAA1522Q9P206 1035 aaPredicted RBP7.3□□□□□ -1.24
BEST1-202ENST00000449131 OR12D3Q9UGF7 316 aa7.3□□□□□ -1.24
BEST1-202ENST00000449131 MCM8Q9UJA3 840 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms