RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MMP13P45452 471 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 ARPP19P56211 112 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 NRG1Q02297 640 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 PKN2Q16513 984 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 DDR2Q16832 855 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 PARP6Q2NL67 630 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 MGAT5BQ3V5L5 792 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 ANKRD20A2Q5SQ80 823 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 FNBP1LQ5T0N5 605 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 ANKRD20A1Q5TYW2 823 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 ANKRD20A3Q5VUR7 823 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 TADA2BQ86TJ2 420 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 ANKMY2Q8IV38 441 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 CCDC13Q8IYE1 715 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 FBXO36Q8NEA4 188 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 ARHGEF2Q92974 986 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 HDAC11Q96DB2 347 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 P2RY11Q96G91 374 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 PGLYRP2Q96PD5 576 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 CDK5RAP1Q96SZ6 601 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 PRDM12Q9H4Q4 367 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 EIF2B3Q9NR50 452 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 TMPRSS4Q9NRS4 437 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 SENP1Q9P0U3 644 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 FNIP2Q9P278 1114 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 TRHDEQ9UKU6 1024 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 LTBP2Q14767 1821 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 TCRBV7S3A2A0A539 114 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 FAM72CH0Y354 149 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 RNF103O00237 685 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 UPP2O95045 317 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 APOEP02649 317 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 GJA8P48165 433 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 TUFMP49411 452 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 KPNA1P52294 538 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 GEMIN4P57678 1058 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 PPIDQ08752 370 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 GALNT2Q10471 571 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 FASTKD3Q14CZ7 662 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 RTP2Q5QGT7 225 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 UBAP2Q5T6F2 1119 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 FAM72AQ5TYM5 149 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 SLC8B1Q6J4K2 584 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 FAM72DQ6L9T8 149 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 KIAA1841Q6NSI8 718 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 C3orf62Q6ZUJ4 267 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 B4GALNT4Q76KP1 1039 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 FAM72BQ86X60 149 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 LRRC49Q8IUZ0 686 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 COLGALT1Q8NBJ5 622 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 ATAD1Q8NBU5 361 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 CASP10Q92851 521 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 FBXO32Q969P5 355 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 ARMC5Q96C12 935 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 TBC1D31Q96DN5 1066 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 C1orf74Q96LT6 269 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 LGMNQ99538 433 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 C11orf49Q9H6J7 331 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 ANLNQ9NQW6 1124 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 HSFX1Q9UBD0 423 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 MTRRQ9UBK8 725 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 TEX264Q9Y6I9 313 aa10.87□□□□□ -0.67
VIPAS39-203ENST00000448935 NT5C1B-RDH14C9J2C7 533 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 VAV1P15498 845 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 HOXC13P31276 330 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 STX2P32856 288 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 LSP1P33241 339 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 ELK3P41970 407 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 NRLP54845 237 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 IFI35P80217 286 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 GUCY1A3Q02108 690 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 PSMD5Q16401 504 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 MSS51Q4VC12 460 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 SPOUT1Q5T280 376 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 ITPRIPL1Q6GPH6 555 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 RNF19BQ6ZMZ0 732 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 EXOC3L1Q86VI1 746 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 CCNJLQ8IV13 435 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 TAB3Q8N5C8 712 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 ATP6V0D2Q8N8Y2 350 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 PDZD8Q8NEN9 1154 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 TOP1MTQ969P6 601 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 IGSF21Q96ID5 467 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 ZNF558Q96NG5 402 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 PPP1R2P1Q96PQ5 205 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 CYTH2Q99418 400 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 SEPT5Q99719 369 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 SELENOSQ9BQE4 189 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 ACSS3Q9H6R3 686 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 CWH43Q9H720 699 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 NMUR1Q9HB89 426 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 GMIPQ9P107 970 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 IGSF9Q9P2J2 1179 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 PSMC3IPQ9P2W1 217 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 STK39Q9UEW8 545 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 SFMBT1Q9UHJ3 866 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 SLC27A5Q9Y2P5 690 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 MFHAS1Q9Y4C4 1052 aa10.86□□□□□ -0.67
VIPAS39-203ENST00000448935 CLUHO75153 1309 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms