RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 LRRC39Q96DD0 335 aa18.21■□□□□ 0.51
LMNA-208ENST00000448611 SPATA17Q96L03 361 aa18.21■□□□□ 0.51
LMNA-208ENST00000448611 FCRL2Q96LA5 508 aaPredicted RBP18.21■□□□□ 0.51
LMNA-208ENST00000448611 TMEM51Q9NW97 253 aa18.21■□□□□ 0.51
LMNA-208ENST00000448611 IGSF9Q9P2J2 1179 aa18.21■□□□□ 0.51
LMNA-208ENST00000448611 ATP11BQ9Y2G3 1177 aa18.21■□□□□ 0.51
LMNA-208ENST00000448611 COL4A6Q14031 1691 aa18.21■□□□□ 0.5
LMNA-208ENST00000448611 TCRBV9S1A1TA0A576 114 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 TMEM120BA0PK00 339 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 GMNCA6NCL1 334 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 KCNK1O00180 336 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 RTN3O95197 1032 aaPredicted RBP18.2■□□□□ 0.5
LMNA-208ENST00000448611 SRGAP2BP0DMP2 458 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 BRAFP15056 766 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 PTPN3P26045 913 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 GARSP41250 739 aaKnown RBP18.2■□□□□ 0.5
LMNA-208ENST00000448611 GRIA1P42261 906 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 ALDH7A1P49419 539 aaKnown RBP18.2■□□□□ 0.5
LMNA-208ENST00000448611 CDK16Q00536 496 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 NLRP14Q86W24 1093 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 RNF168Q8IYW5 571 aaPredicted RBP18.2■□□□□ 0.5
LMNA-208ENST00000448611 C2orf15Q8WU43 125 aaKnown RBP18.2■□□□□ 0.5
LMNA-208ENST00000448611 SLC39A13Q96H72 371 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 SIGLEC10Q96LC7 697 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 SEPT5Q99719 369 aaPredicted RBP18.2■□□□□ 0.5
LMNA-208ENST00000448611 PLAC1Q9HBJ0 212 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 XAB2Q9HCS7 855 aaKnown RBP18.2■□□□□ 0.5
LMNA-208ENST00000448611 INTS9Q9NV88 658 aaKnown RBP18.2■□□□□ 0.5
LMNA-208ENST00000448611 CLIC5Q9NZA1 410 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 TLR6Q9Y2C9 796 aa18.2■□□□□ 0.5
LMNA-208ENST00000448611 RASA4BC9J798 803 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 RASA4O43374 803 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 PSMB4P28070 264 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 HNRNPH2P55795 449 aaKnown RBP18.19■□□□□ 0.5
LMNA-208ENST00000448611 RWDD4Q6NW29 188 aaKnown RBP18.19■□□□□ 0.5
LMNA-208ENST00000448611 ADGRD1Q6QNK2 874 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 PDCD7Q8N8D1 485 aaKnown RBP18.19■□□□□ 0.5
LMNA-208ENST00000448611 DPF3Q92784 378 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 FBXO32Q969P5 355 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 CYTH2Q99418 400 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 PAFAH2Q99487 392 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 VN1R3Q9BXE9 311 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 TMEM39AQ9NV64 488 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 ZC3H7BQ9UGR2 993 aaKnown RBP18.19■□□□□ 0.5
LMNA-208ENST00000448611 CDY1Q9Y6F8 540 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 F5H423 210 aaPredicted RBP18.19■□□□□ 0.5
LMNA-208ENST00000448611 NDUFAB1O14561 156 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 ADAM12O43184 909 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 PIAS1O75925 651 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 FAM107AO95990 144 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 MLNP12872 115 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 NRG1Q02297 640 aaPredicted RBP18.19■□□□□ 0.5
LMNA-208ENST00000448611 DUSP4Q13115 394 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 MPP2Q14168 576 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 SLC8B1Q6J4K2 584 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 DEPDC1BQ8WUY9 529 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 DCAKDQ8WVC6 231 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 TBC1D31Q96DN5 1066 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 MRRFQ96E11 262 aaKnown RBP18.19■□□□□ 0.5
LMNA-208ENST00000448611 CCT8L2Q96SF2 557 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 COMMD8Q9NX08 183 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 MTRRQ9UBK8 725 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 HS3ST4Q9Y661 456 aa18.19■□□□□ 0.5
LMNA-208ENST00000448611 CCDC85CA6NKD9 419 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 FGF10O15520 208 aaPredicted RBP18.18■□□□□ 0.5
LMNA-208ENST00000448611 MTSS1O43312 755 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 C1QAP02745 245 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 CLTBP09497 229 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 RFC2P35250 354 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 SARNPP82979 210 aaKnown RBP18.18■□□□□ 0.5
LMNA-208ENST00000448611 TAF10Q12962 218 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 RASIP1Q5U651 963 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 PID1Q7Z2X4 250 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 MPP5Q8N3R9 675 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 FBXO22Q8NEZ5 403 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 IGSF21Q96ID5 467 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 CELF6Q96J87 481 aaKnown RBP18.18■□□□□ 0.5
LMNA-208ENST00000448611 C1orf74Q96LT6 269 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 GORASP1Q9BQQ3 440 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 CCDC134Q9H6E4 229 aa18.18■□□□□ 0.5
LMNA-208ENST00000448611 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.18■□□□□ 0.5
LMNA-208ENST00000448611 KLHL8Q9P2G9 620 aaPredicted RBP18.18■□□□□ 0.5
LMNA-208ENST00000448611 WDR27A2RRH5 827 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 SLC2A3P11169 496 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 STX2P32856 288 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 PSEN1P49768 467 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 MLLT6P55198 1093 aaPredicted RBP18.17■□□□□ 0.5
LMNA-208ENST00000448611 RPL10AP62906 217 aaKnown RBP18.17■□□□□ 0.5
LMNA-208ENST00000448611 ZNF33AQ06730 810 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 USP41Q3LFD5 358 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 KBTBD12Q3ZCT8 623 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 LRRC8BQ6P9F7 803 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 TNS4Q8IZW8 715 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 ZSCAN18Q8TBC5 510 aaPredicted RBP18.17■□□□□ 0.5
LMNA-208ENST00000448611 CFAP36Q96G28 342 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 EBNA1BP2Q99848 306 aaKnown RBP18.17■□□□□ 0.5
LMNA-208ENST00000448611 KCNK9Q9NPC2 374 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 TLR8Q9NR97 1041 aaKnown RBP18.17■□□□□ 0.5
LMNA-208ENST00000448611 SENP1Q9P0U3 644 aa18.17■□□□□ 0.5
LMNA-208ENST00000448611 TTLL3Q9Y4R7 772 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms