RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 RRN3Q9NYV6 651 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 TMEM59LQ9UK28 342 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 ABCA7Q8IZY2 2146 aa15.26■□□□□ 0.03
USE1-202ENST00000445667 IGHV1OR15-9A0A0B4J2B8 117 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 ZNF217O75362 1048 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 PAGE1O75459 146 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 ADCY5O95622 1261 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 ATP5BP06576 529 aaKnown RBP15.25■□□□□ 0.03
USE1-202ENST00000445667 DLDP09622 509 aaKnown RBP15.25■□□□□ 0.03
USE1-202ENST00000445667 CSKP41240 450 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 PTGER3P43115 390 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 COPAP53621 1224 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 ATXN1P54253 815 aaKnown RBP15.25■□□□□ 0.03
USE1-202ENST00000445667 DEUP1Q05D60 604 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 AUHQ13825 339 aaKnown RBP15.25■□□□□ 0.03
USE1-202ENST00000445667 E2F5Q15329 346 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 AASDHQ4L235 1098 aaPredicted RBP15.25■□□□□ 0.03
USE1-202ENST00000445667 TCEAL6Q6IPX3 200 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 TRNP1Q6NT89 227 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 FBXL22Q6P050 247 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 CYP2U1Q7Z449 544 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 C14orf80Q86SX3 495 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 CACUL1Q86Y37 369 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 TMPRSS6Q8IU80 811 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 ZNF557Q8N988 423 aaPredicted RBP15.25■□□□□ 0.03
USE1-202ENST00000445667 C12orf50Q8NA57 414 aaPredicted RBP15.25■□□□□ 0.03
USE1-202ENST00000445667 PIGKQ92643 395 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 TCEAL3Q969E4 200 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 IGSF8Q969P0 613 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 NT5C3BQ969T7 300 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 TTC17Q96AE7 1141 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 NAP1L5Q96NT1 182 aaPredicted RBP15.25■□□□□ 0.03
USE1-202ENST00000445667 C11orf70Q9BRQ4 267 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 MTG2Q9H4K7 406 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 WDCPQ9H6R7 721 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 PRDM16Q9HAZ2 1276 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 ANLNQ9NQW6 1124 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 METTL5Q9NRN9 209 aaKnown RBP15.25■□□□□ 0.03
USE1-202ENST00000445667 VPS45Q9NRW7 570 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 DLL3Q9NYJ7 618 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 VANGL2Q9ULK5 521 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 STAP1Q9ULZ2 295 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 HS3ST4Q9Y661 456 aa15.25■□□□□ 0.03
USE1-202ENST00000445667 RALGAPA1Q6GYQ0 2036 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 SPAG17Q6Q759 2223 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 THADAQ6YHU6 1953 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 PATE3B3GLJ2 98 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 I6L893 689 aaPredicted RBP15.24■□□□□ 0.03
USE1-202ENST00000445667 UNGP13051 313 aaPredicted RBP15.24■□□□□ 0.03
USE1-202ENST00000445667 MMP8P22894 467 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 CXCR3P49682 368 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 IRAK1P51617 712 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 RPL6Q02878 288 aaKnown RBP15.24■□□□□ 0.03
USE1-202ENST00000445667 CENPCQ03188 943 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 PUM1Q14671 1186 aaKnown RBP eCLIP15.24■□□□□ 0.03
USE1-202ENST00000445667 SLC25A52Q3SY17 297 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 FILIP1LQ4L180 1135 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 PITRM1Q5JRX3 1037 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 SLC36A4Q6YBV0 504 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 APCDD1Q8J025 514 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 CCAR2Q8N163 923 aaKnown RBP15.24■□□□□ 0.03
USE1-202ENST00000445667 EMC1Q8N766 993 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 PGAP3Q96FM1 320 aaPredicted RBP15.24■□□□□ 0.03
USE1-202ENST00000445667 SIPA1Q96FS4 1042 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 CFAP57Q96MR6 1250 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 RPRD1AQ96P16 312 aaPredicted RBP15.24■□□□□ 0.03
USE1-202ENST00000445667 TKTL2Q9H0I9 626 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 CBX8Q9HC52 389 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 TMPRSS4Q9NRS4 437 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 SEPT11Q9NVA2 429 aaKnown RBP15.24■□□□□ 0.03
USE1-202ENST00000445667 ARHGEF38Q9NXL2 777 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 KIAA1522Q9P206 1035 aaPredicted RBP15.24■□□□□ 0.03
USE1-202ENST00000445667 CDV3Q9UKY7 258 aaKnown RBP15.24■□□□□ 0.03
USE1-202ENST00000445667 SNX10Q9Y5X0 201 aa15.24■□□□□ 0.03
USE1-202ENST00000445667 AP5Z1O43299 807 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 GJB6O95452 261 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 PDGFRAP16234 1089 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 CTSOP43234 321 aaPredicted RBP15.23■□□□□ 0.03
USE1-202ENST00000445667 CAMK2GQ13555 558 aaPredicted RBP15.23■□□□□ 0.03
USE1-202ENST00000445667 CLEC16AQ2KHT3 1053 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 RAB6CQ53S08 254 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 RABGAP1LQ5R372 815 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 TRIM72Q6ZMU5 477 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 SND1Q7KZF4 910 aaKnown RBP eCLIP15.23■□□□□ 0.03
USE1-202ENST00000445667 LUZP1Q86V48 1076 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 OR2T3Q8NH03 318 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 PRCCQ92733 491 aaPredicted RBP15.23■□□□□ 0.03
USE1-202ENST00000445667 MYO19Q96H55 970 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 AGPAT1Q99943 283 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 RAB6CQ9H0N0 254 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 PRSS16Q9NQE7 514 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 ITM2CQ9NQX7 267 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 TMEM74BQ9NUR3 256 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 ERVW-1Q9UQF0 538 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 DCHS1Q96JQ0 3298 aa15.23■□□□□ 0.03
USE1-202ENST00000445667 ATXN2Q99700 1313 aaKnown RBP15.22■□□□□ 0.03
USE1-202ENST00000445667 A0A1B0GVM2 712 aa15.22■□□□□ 0.03
USE1-202ENST00000445667 TCAF2A6NFQ2 919 aa15.22■□□□□ 0.03
USE1-202ENST00000445667 FOXD2O60548 495 aaPredicted RBP15.22■□□□□ 0.03
USE1-202ENST00000445667 NDUFS2O75306 463 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms